7OKB | pdb_00007okb

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 45

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
U	SCOP2 Family	UDP N-acetylglucosamine acyltransferase-like	8105346	4002830	SCOP2 (2022-06-29)
U	SCOP2 Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2 (2022-06-29)
T	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
O [auth L]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
N [auth K]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
M [auth J]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
L [auth O]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
K [auth N]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
J [auth M]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	SNF2-rel_dom,Helicase_C	e7okbD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Z	SNF2-rel_dom,Helicase_C	e7okbZ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Y	SNF2-rel_dom,Helicase_C	e7okbY1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
X	SNF2-rel_dom,Helicase_C	e7okbX1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
W	SNF2-rel_dom,Helicase_C	e7okbW1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
V	SNF2-rel_dom,Helicase_C	e7okbV1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
U	SNF2-rel_dom,Helicase_C	e7okbU1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
T	SNF2-rel_dom,Helicase_C	e7okbT1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
S	SNF2-rel_dom,Helicase_C	e7okbS1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
R	SNF2-rel_dom,Helicase_C	e7okbR1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Q	SNF2-rel_dom,Helicase_C	e7okbQ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
P	SNF2-rel_dom,Helicase_C	e7okbP1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
O [auth L]	SNF2-rel_dom,Helicase_C	e7okbL1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
N [auth K]	SNF2-rel_dom,Helicase_C	e7okbK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
M [auth J]	SNF2-rel_dom,Helicase_C	e7okbJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
L [auth O]	SNF2-rel_dom,Helicase_C	e7okbO1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
K [auth N]	SNF2-rel_dom,Helicase_C	e7okbN1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
J [auth M]	SNF2-rel_dom,Helicase_C	e7okbM1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
I	SNF2-rel_dom,Helicase_C	e7okbI1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
H	SNF2-rel_dom,Helicase_C	e7okbH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
G	SNF2-rel_dom,Helicase_C	e7okbG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
F	SNF2-rel_dom,Helicase_C	e7okbF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
E	SNF2-rel_dom,Helicase_C	e7okbE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
DA [auth d]	SNF2-rel_dom,Helicase_C	e7okbd1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
CA [auth c]	SNF2-rel_dom,Helicase_C	e7okbc1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
C	SNF2-rel_dom,Helicase_C	e7okbC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
BA [auth b]	SNF2-rel_dom,Helicase_C	e7okbb1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
B	SNF2-rel_dom,Helicase_C	e7okbB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
AA [auth a]	SNF2-rel_dom,Helicase_C	e7okba1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
A	SNF2-rel_dom,Helicase_C	e7okbA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity O-acyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	carbohydrate derivative biosynthetic process lipooligosaccharide metabolic process glycolipid metabolic process lipid A biosynthetic process liposaccharide metabolic process carbohydrate derivative metabolic process lipid biosynthetic process primary metabolic process glycolipid biosynthetic process phospholipid biosynthetic process phospholipid metabolic process lipid A metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process carbohydrate derivative biosynthetic process lipooligosaccharide metabolic process glycolipid metabolic process lipid A biosynthetic process liposaccharide metabolic process carbohydrate derivative metabolic process lipid biosynthetic process primary metabolic process glycolipid biosynthetic process phospholipid biosynthetic process phospholipid metabolic process lipid A metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process metabolic process cellular process phosphorus metabolic process lipid metabolic process	cellular anatomical structure membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR029098	UDP N-acetylglucosamine O-acyltransferase, C-terminal	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR037157	UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR001451	Hexapeptide repeat	Repeat

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.