7OK2 | pdb_00007ok2

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 3

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth V]	SNF2-rel_dom,Helicase_C	e7ok2V1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Y [auth U]	SNF2-rel_dom,Helicase_C	e7ok2U1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
X [auth T]	SNF2-rel_dom,Helicase_C	e7ok2T1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
W [auth S]	SNF2-rel_dom,Helicase_C	e7ok2S1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
V [auth R]	SNF2-rel_dom,Helicase_C	e7ok2R1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
U [auth Q]	SNF2-rel_dom,Helicase_C	e7ok2Q1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
T [auth P]	SNF2-rel_dom,Helicase_C	e7ok2P1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
S [auth O]	SNF2-rel_dom,Helicase_C	e7ok2O1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
R [auth N]	SNF2-rel_dom,Helicase_C	e7ok2N1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Q [auth M]	SNF2-rel_dom,Helicase_C	e7ok2M1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
P [auth L]	SNF2-rel_dom,Helicase_C	e7ok2L1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
O [auth K]	SNF2-rel_dom,Helicase_C	e7ok2K1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
N [auth J]	SNF2-rel_dom,Helicase_C	e7ok2J1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
M [auth I]	SNF2-rel_dom,Helicase_C	e7ok2I1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
L [auth H]	SNF2-rel_dom,Helicase_C	e7ok2H1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
K [auth G]	SNF2-rel_dom,Helicase_C	e7ok2G1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
J [auth F]	SNF2-rel_dom,Helicase_C	e7ok2F1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
I [auth E]	SNF2-rel_dom,Helicase_C	e7ok2E1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
H [auth D]	SNF2-rel_dom,Helicase_C	e7ok2D1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
G [auth C]	SNF2-rel_dom,Helicase_C	e7ok2C1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
F [auth B]	SNF2-rel_dom,Helicase_C	e7ok2B1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
E [auth A]	SNF2-rel_dom,Helicase_C	e7ok2A1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
DA [auth Z]	SNF2-rel_dom,Helicase_C	e7ok2Z1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
D [auth 4]	SNF2-rel_dom,Helicase_C	e7ok241	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
CA [auth Y]	SNF2-rel_dom,Helicase_C	e7ok2Y1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
C [auth 3]	SNF2-rel_dom,Helicase_C	e7ok231	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
BA [auth X]	SNF2-rel_dom,Helicase_C	e7ok2X1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
B [auth 2]	SNF2-rel_dom,Helicase_C	e7ok221	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
AA [auth W]	SNF2-rel_dom,Helicase_C	e7ok2W1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
A [auth 1]	SNF2-rel_dom,Helicase_C	e7ok211	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2 (Acetyltransf_11)	Udp N-acetylglucosamine O-acyltransferase; Domain 2	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyris ...	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyristoyl)glucosamine and acetate.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity O-acyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process cellular process macromolecule metabolic process lipid metabolic process lipooligosaccharide metabolic process glycolipid metabolic process lipid A biosynthetic process glycolipid biosynthetic process phospholipid biosynthetic process phospholipid metabolic process lipid A metabolic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR029098	UDP N-acetylglucosamine O-acyltransferase, C-terminal	Domain
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	Family
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR037157	UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily	Homologous Superfamily
A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], A [auth 1], AA [auth W], B [auth 2], BA [auth X], C [auth 3], CA [auth Y], D [auth 4], DA [auth Z], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth F], K [auth G], L [auth H], M [auth I], N [auth J], O [auth K], P [auth L], Q [auth M], R [auth N], S [auth O], T [auth P], U [auth Q], V [auth R], W [auth S], X [auth T], Y [auth U], Z [auth V]	IPR001451	Hexapeptide repeat	Repeat

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.