Human mitochondrial ribosome in complex with P/E-tRNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| BB [auth XO] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8033689 | 3000995 | SCOP2B (2022-06-29) |
| YA [auth XL] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072072 | 3000433 | SCOP2B (2022-06-29) |
| XA [auth XK] | SCOP2B Superfamily | Ribosomal protein L13 | 8100460 | 3001134 | SCOP2B (2022-06-29) |
| E [auth 4] | SCOP2B Superfamily | Ribosomal protein L36 | 8083324 | 3001346 | SCOP2B (2022-06-29) |
| TA [auth XF] | SCOP2B Superfamily | Ribosomal protein L4 | 8080706 | 3001146 | SCOP2B (2022-06-29) |
| OA [auth AY] | SCOP2B Superfamily | Mitochondrial 28S ribosomal protein S31-like | 8090914 | 3002471 | SCOP2B (2022-06-29) |
| HA [auth AR] | SCOP2B Superfamily | Mitochondrial 28S ribosomal protein S22-like | 8051932 | 3002074 | SCOP2B (2022-06-29) |
| GA [auth AQ] | SCOP2B Superfamily | Ribosomal protein S21 | 8053089 | 3002159 | SCOP2B (2022-06-29) |
| AA [auth AK] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052599 | 3000068 | SCOP2B (2022-06-29) |
| Z [auth AJ] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095431 | 3000135 | SCOP2B (2022-06-29) |
| Y [auth AI] | SCOP2B Superfamily | Translational machinery components | 8098948 | 3000571 | SCOP2B (2022-06-29) |
| B [auth 1] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8075050 | 3001320 | SCOP2B (2022-06-29) |
| R [auth AB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063850 | 3001397 | SCOP2B (2022-06-29) |
| L [auth A0] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8091481 | 3000334 | SCOP2B (2022-06-29) |
| J [auth 9] | SCOP2B Superfamily | Mitochondrial ribosomal protein L27-like | 8053893 | 3002240 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth 8] | Spuma_A9PTase | e7og481 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| LC [auth t6] | Spuma_A9PTase | e7og4t61 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| KC [auth t5] | Ribosomal_L12_N | e7og4t51 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| JC [auth t4] | Ribosomal_L12_N | e7og4t41 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| IC [auth t3] | Ribosomal_L12_N | e7og4t31 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| HC [auth t2] | Ribosomal_L12_N | e7og4t21 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| GC [auth t1] | Spuma_A9PTase | e7og4t11 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| FC [auth s] | Ribosomal_L12_N | e7og4s1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| DC [auth r] | Ribosomal_L12_N | e7og4r1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| BC [auth p] | Ribosomal_L12_N | e7og4p1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| H [auth 7] | Ribosomal_L12_N | e7og471 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| AC [auth o] | Ribosomal_L12_N | e7og4o1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| ZB [auth m] | Spuma_A9PTase | e7og4m1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| XB [auth k] | Ribosomal_L12_N | e7og4k1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| WB [auth j] | Ribosomal_L12_N | e7og4j1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| VB [auth i] | Ribosomal_L12_N | e7og4i1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| UB [auth h] | Abhydrolase_1 | e7og4h1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Abhydrolase_1 | ECOD (develop294) |
| TB [auth g] | Ribosomal_L12_N | e7og4g1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| SB [auth f] | Ribosomal_L12_N | e7og4f1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| RB [auth e] | Ribosomal_L12_N | e7og4e1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| G [auth 6] | Ribosomal_L12_N | e7og461 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| QB [auth d] | Spuma_A9PTase | e7og4d1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| PB [auth c] | Ribosomal_L12_N | e7og4c1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| OB [auth b] | Ribosomal_L12_N | e7og4b1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| NB [auth a] | Ribosomal_L12_N | e7og4a1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| MB [auth XZ] | Ribosomal_L12_N | e7og4XZ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| LB [auth XY] | Ribosomal_L12_N | e7og4XY1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| KB [auth XX] | Ribosomal_L12_N | e7og4XX1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| JB [auth XW] | Spuma_A9PTase | e7og4XW1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| IB [auth XV] | Ribosomal_L12_N | e7og4XV1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| HB [auth XU] | Ribosomal_L12_N | e7og4XU1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| F [auth 5] | Ribosomal_L12_N | e7og451 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| GB [auth XT] | Ribosomal_L12_N | e7og4XT1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| FB [auth XS] | Ribosomal_L12_N | e7og4XS1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| EB [auth XR] | Abhydrolase_1 | e7og4XR1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Abhydrolase_1 | ECOD (develop294) |
| DB [auth XQ] | Spuma_A9PTase | e7og4XQ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| CB [auth XP] | Ribosomal_L12_N | e7og4XP1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| BB [auth XO] | Ribosomal_L12_N | e7og4XO1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| AB [auth XN] | Ribosomal_L12_N | e7og4XN1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| ZA [auth XM] | Ribosomal_L12_N | e7og4XM1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| YA [auth XL] | Ribosomal_L12_N | e7og4XL1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| XA [auth XK] | Ribosomal_L12_N | e7og4XK1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| E [auth 4] | Ribosomal_L12_N | e7og441 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| WA [auth XJ] | Ribosomal_L12_N | e7og4XJ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| UA [auth XH] | Ribosomal_L12_N | e7og4XH1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| TA [auth XF] | Ribosomal_L12_N | e7og4XF1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| SA [auth XE] | Ribosomal_L12_N | e7og4XE1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| RA [auth XD] | Ribosomal_L12_N | e7og4XD1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| PA [auth AZ] | Spuma_A9PTase | e7og4AZ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| OA [auth AY] | Spuma_A9PTase | e7og4AY1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| NA [auth AX] | Spuma_A9PTase | e7og4AX1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| D [auth 3] | Abhydrolase_1 | e7og431 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Abhydrolase_1 | ECOD (develop294) |
| MA [auth AW] | Spuma_A9PTase | e7og4AW1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| LA [auth AV] | Spuma_A9PTase | e7og4AV1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| KA [auth AU] | Spuma_A9PTase | e7og4AU1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| JA [auth AT] | Spuma_A9PTase | e7og4AT1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| IA [auth AS] | Spuma_A9PTase | e7og4AS1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| HA [auth AR] | Spuma_A9PTase | e7og4AR1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| GA [auth AQ] | Spuma_A9PTase | e7og4AQ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| FA [auth AP] | Spuma_A9PTase | e7og4AP1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| EA [auth AO] | Spuma_A9PTase | e7og4AO1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| DA [auth AN] | Spuma_A9PTase | e7og4AN1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| C [auth 2] | Ribosomal_L12_N | e7og421 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| CA [auth AM] | Spuma_A9PTase | e7og4AM1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| BA [auth AL] | Spuma_A9PTase | e7og4AL1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| AA [auth AK] | Spuma_A9PTase | e7og4AK1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| Z [auth AJ] | Spuma_A9PTase | e7og4AJ1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| Y [auth AI] | Spuma_A9PTase | e7og4AI1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| X [auth AH] | Spuma_A9PTase | e7og4AH1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| W [auth AG] | Spuma_A9PTase | e7og4AG1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| V [auth AF] | Spuma_A9PTase | e7og4AF1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| U [auth AE] | Spuma_A9PTase | e7og4AE1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| T [auth AD] | Spuma_A9PTase | e7og4AD1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| B [auth 1] | Ribosomal_L12_N | e7og411 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| S [auth AC] | Spuma_A9PTase | e7og4AC1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| R [auth AB] | Spuma_A9PTase | e7og4AB1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| O [auth A3] | Spuma_A9PTase | e7og4A31 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| N [auth A2] | Spuma_A9PTase | e7og4A21 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| M [auth A1] | Spuma_A9PTase | e7og4A11 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| L [auth A0] | Spuma_A9PTase | e7og4A01 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Spuma_A9PTase | ECOD (develop294) |
| J [auth 9] | Ribosomal_L12_N | e7og491 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
| A [auth 0] | Ribosomal_L12_N | e7og401 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L12_N | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| G [auth 6] | PF01161 | Phosphatidylethanolamine-binding protein (PBP) | Phosphatidylethanolamine-binding protein | Domain | |
| MB [auth XZ] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| LB [auth XY] | PF06984 | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47) | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) | - | Family |
| KB [auth XX] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| IB [auth XV] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| IB [auth XV] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| HB [auth XU] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| F [auth 5] | PF07147 | Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9) | Mitochondrial 28S ribosomal protein S30 (PDCD9) | - | Family |
| GB [auth XT] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| FB [auth XS] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| EB [auth XR] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| DB [auth XQ] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| CB [auth XP] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| BB [auth XO] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| AB [auth XN] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| ZA [auth XM] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| YA [auth XL] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| XA [auth XK] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| E [auth 4] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| WA [auth XJ] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| WA [auth XJ] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| VA [auth XI] | PF00466 | Ribosomal protein L10 (Ribosomal_L10) | Ribosomal protein L10 | - | Family |
| UA [auth XH] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| UA [auth XH] | PF25131 | Large ribosomal subunit protein bL9m N-terminal domain (bL9m_N) | Large ribosomal subunit protein bL9m N-terminal domain | This is a presumed domain found at the very N-terminal of Large ribosomal subunit protein bL9m from animals, a structural component of the large subunit of the ribosome. According to structure predictions, it may consist in a hairpin with two beta-sh ... | Domain |
| TA [auth XF] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| SA [auth XE] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| RA [auth XD] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| RA [auth XD] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| PA [auth AZ] | PF08293 | Mitochondrial ribosomal subunit S27 (MRP-S33) | Mitochondrial ribosomal subunit S27 | - | Family |
| NA [auth AX] | PF10236 | Mitochondrial ribosomal death-associated protein 3 (DAP3) | Mitochondrial ribosomal death-associated protein 3 | - | Family |
| D [auth 3] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| KA [auth AU] | PF14943 | Mitochondrial ribosome subunit S26 (MRP-S26) | Mitochondrial ribosome subunit S26 | - | Family |
| JA [auth AT] | PF05047 | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8) | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain | The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ... | Domain |
| IA [auth AS] | PF10484 | Mitochondrial ribosomal protein S23 (MRP-S23) | Mitochondrial ribosomal protein S23 | - | Family |
| HA [auth AR] | PF10245 | Mitochondrial 28S ribosomal protein S22 (MRP-S22) | Mitochondrial 28S ribosomal protein S22 | - | Family |
| GA [auth AQ] | PF01165 | Ribosomal protein S21 (Ribosomal_S21) | Ribosomal protein S21 | - | Family |
| FA [auth AP] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| EA [auth AO] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| DA [auth AN] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| C [auth 2] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| CA [auth AM] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| BA [auth AL] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| AA [auth AK] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| Z [auth AJ] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| Y [auth AI] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| X [auth AH] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| W [auth AG] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| V [auth AF] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| U [auth AE] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| T [auth AD] | PF21251 | Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N) | Small ribosomal subunit protein uS5m, N-terminal | This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ... | Domain |
| T [auth AD] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| T [auth AD] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| S [auth AC] | PF14955 | Mitochondrial ribosome subunit S24 (MRP-S24) | Mitochondrial ribosome subunit S24 | - | Family |
| R [auth AB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| P [auth A4] | PF13812 | Pentatricopeptide repeat domain (PPR_3) | Pentatricopeptide repeat domain | - | Repeat |
| P [auth A4] | PF22330 | Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR) | Small ribosomal subunit protein mS39, PPR | - | Repeat |
| N [auth A2] | PF06747 | CHCH domain (CHCH) | CHCH domain | we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ... | Domain |
| M [auth A1] | PF10213 | Mitochondrial ribosomal subunit protein (MRP-S28) | Mitochondrial ribosomal subunit protein | - | Family |
| L [auth A0] | PF16053 | Mitochondrial 28S ribosomal protein S34 (MRP-S34) | Mitochondrial 28S ribosomal protein S34 | - | Family |
| A [auth 0] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |














