7O56
X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element solved by Phosphorus and Sulphur SAD methods
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8077685 | 3000034 | SCOP2B (2021-05-27) |
D [auth B] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8077685 | 3000034 | SCOP2B (2021-05-27) |
E [auth C] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8077685 | 3000034 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00605 | e7o56A1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00605 | ECOD (1.6) |
D [auth B] | PF00605 | e7o56B1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00605 | ECOD (1.6) |
E [auth C] | PF00605 | e7o56C1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00605 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B], E [auth C] | PF00605 | Interferon regulatory factor transcription factor (IRF) | Interferon regulatory factor transcription factor | This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B], E [auth C] | IPR001346 | Interferon regulatory factor, DNA-binding domain | Domain |
A, D [auth B], E [auth C] | IPR019817 | Interferon regulatory factor, conserved site | Conserved Site |
A, D [auth B], E [auth C] | IPR019471 | Interferon regulatory factor-3 | Domain |
A, D [auth B], E [auth C] | IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily |
A, D [auth B], E [auth C] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A, D [auth B], E [auth C] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A, D [auth B], E [auth C] | IPR017855 | SMAD-like domain superfamily | Homologous Superfamily |