7NZ3 | pdb_00007nz3

Cryo-EM structure of apposed MukBEF-MatP monomers on DNA

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
T [auth J2]	MatP_C	e7nz3J22	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
T [auth J2]	MatP	e7nz3J21	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
S [auth J1]	MatP_C	e7nz3J11	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
S [auth J1]	MatP	e7nz3J12	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
R [auth I2]	MatP_C	e7nz3I22	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
R [auth I2]	MatP	e7nz3I21	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
Q [auth I1]	MatP_C	e7nz3I12	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: MatP_C	ECOD (1.6)
Q [auth I1]	MatP	e7nz3I11	A: alpha arrays	X: Macrodomain Ter protein MatP (From Topology)	H: Macrodomain Ter protein MatP (From Topology)	T: Macrodomain Ter protein MatP	F: MatP	ECOD (1.6)
P [auth H2]	PP-binding	e7nz3H21	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
O [auth H1]	PP-binding	e7nz3H11	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
N [auth G2]	PP-binding	e7nz3G21	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
M [auth G1]	PP-binding	e7nz3G11	A: alpha bundles	X: ACP-like	H: Acyl-carrier protein (ACP) (From Topology)	T: Acyl-carrier protein (ACP)	F: PP-binding	ECOD (1.6)
L [auth F2]	MukE_C	e7nz3F21	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
L [auth F2]	MukE_N	e7nz3F22	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
K [auth F1]	MukE_C	e7nz3F12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
K [auth F1]	MukE_N	e7nz3F11	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
J [auth E2]	MukE_C	e7nz3E22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
J [auth E2]	MukE_N	e7nz3E21	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
I [auth E1]	MukE_C	e7nz3E12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukE_C	ECOD (1.6)
I [auth E1]	MukE_N	e7nz3E11	A: a+b two layers	X: Chromosome partition protein mukE N-terminal domain (From Topology)	H: Chromosome partition protein mukE N-terminal domain (From Topology)	T: Chromosome partition protein mukE N-terminal domain	F: MukE_N	ECOD (1.6)
H [auth D2]	KicB	e7nz3D21	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
G [auth D1]	KicB	e7nz3D11	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KicB	ECOD (1.6)
F [auth C2]	MukF_C	e7nz3C22	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
F [auth C2]	MukF_M	e7nz3C21	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)
E [auth C1]	MukF_C	e7nz3C12	A: alpha arrays	X: HTH	H: HTH	T: winged	F: MukF_C	ECOD (1.6)
E [auth C1]	MukF_M	e7nz3C11	A: alpha bundles	X: STAT-like	H: MukF C-terminal domain-like (From Topology)	T: MukF C-terminal domain-like	F: MukF_M	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
V [auth L1], X [auth N1]	matS2 DNA 80 b, oligo FBA770	-	-	-
U [auth K1], W [auth M1]	matS2 DNA 80 b, oligo FBA769	-	-	-
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	Macrodomain Ter protein	sequence-specific DNA binding DNA binding binding nucleic acid binding	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process cell division	cellular anatomical structure intracellular anatomical structure cytoplasm
M [auth G1], N [auth G2], O [auth H1], P [auth H2]	Acyl carrier protein	-	-	-
I [auth E1], J [auth E2], K [auth F1], L [auth F2]	Chromosome partition protein MukE	-	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	Chromosome partition protein MukF	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	Chromosome partition protein MukB	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cell division cell cycle chromosome segregation cell cycle process cellular component organization organelle organization chromosome condensation chromosome organization cellular component organization or biogenesis	cellular anatomical structure nucleoid intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	IPR013321	Arc-type ribbon-helix-helix	Homologous Superfamily
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	IPR009390	Macrodomain Ter protein, MatP	Family
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	IPR035375	MatP, C-terminal ribbon-helix-helix domain	Domain
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	IPR038339	MatP, N-terminal domain superfamily	Homologous Superfamily
Q [auth I1], R [auth I2], S [auth J1], T [auth J2]	IPR035087	MatP, N-terminal	Domain
I [auth E1], J [auth E2], K [auth F1], L [auth F2]	IPR042038	MukE, N-terminal domain	Homologous Superfamily
I [auth E1], J [auth E2], K [auth F1], L [auth F2]	IPR042037	MukE, C-terminal domain	Homologous Superfamily
I [auth E1], J [auth E2], K [auth F1], L [auth F2]	IPR007385	Prokaryotic chromosome segregation/condensation protein MukE	Family
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR005582	Chromosome partition protein MukF	Family
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR036141	MukF, middle domain superfamily	Homologous Superfamily
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR033439	Chromosome partition protein MukF, winged-helix domain	Domain
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR038198	MukF, C-terminal domain superfamily	Homologous Superfamily
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR033441	Chromosome partition protein MukF, C-terminal domain	Domain
E [auth C1], F [auth C2], G [auth D1], H [auth D2]	IPR033440	Chromosome partition protein MukF, middle domain	Domain
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR042501	MukB, hinge domain superfamily	Homologous Superfamily
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR050308	Chromosome partition protein MukB/SMC	Family
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR007406	MukB, N-terminal domain	Domain
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR032520	MukB, hinge domain	Domain
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR012090	Chromosome partition protein MukB	Family
A [auth A1], B [auth A2], C [auth B1], D [auth B2]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily