7NTM

Cryo-EM structure of S.cerevisiae native alcohol dehydrogenase 1 (ADH1) in its tetrameric apo state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF08240	e7ntmA1	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: PF08240	ECOD (1.6)
A	PF00107	e7ntmA2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: PF00107	ECOD (1.6)
B	PF08240	e7ntmB2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: PF08240	ECOD (1.6)
B	PF00107	e7ntmB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: PF00107	ECOD (1.6)
C [auth D]	PF08240	e7ntmD2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: PF08240	ECOD (1.6)
C [auth D]	PF00107	e7ntmD1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: PF00107	ECOD (1.6)
D [auth C]	PF08240	e7ntmC2	A: beta barrels	X: GroES-like	H: GroES-related	T: Alcohol dehydrogenase-like, N-terminal domain	F: PF08240	ECOD (1.6)
D [auth C]	PF00107	e7ntmC1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: PF00107	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth D], D [auth C]	PF00107	Zinc-binding dehydrogenase (ADH_zinc_N)	Zinc-binding dehydrogenase	-	Domain
A, B, C [auth D], D [auth C]	PF08240	Alcohol dehydrogenase GroES-like domain (ADH_N)	Alcohol dehydrogenase GroES-like domain	This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure [1-2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth D], D [auth C]	Alcohol dehydrogenase 1	oxidoreductase activity methylglyoxal reductase (NADH) activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors catalytic activity octanol dehydrogenase (NAD+) activity alcohol dehydrogenase [NAD(P)+] activity alcohol dehydrogenase (NAD+) activity butanol dehydrogenase (NAD+) activity melatonin binding amide binding binding organic cyclic compound binding cation binding oxidoreductase activity methylglyoxal reductase (NADH) activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors catalytic activity octanol dehydrogenase (NAD+) activity alcohol dehydrogenase [NAD(P)+] activity alcohol dehydrogenase (NAD+) activity butanol dehydrogenase (NAD+) activity melatonin binding amide binding binding organic cyclic compound binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding allyl-alcohol dehydrogenase activity identical protein binding protein binding	monosaccharide metabolic process carbohydrate metabolic process energy derivation by oxidation of organic compounds cellular metabolic process organic hydroxy compound metabolic process alcohol metabolic process hexose metabolic process primary metabolic process generation of precursor metabolites and energy ethanol metabolic process fermentation glycolytic fermentation organic substance metabolic process metabolic process monosaccharide metabolic process carbohydrate metabolic process energy derivation by oxidation of organic compounds cellular metabolic process organic hydroxy compound metabolic process alcohol metabolic process hexose metabolic process primary metabolic process generation of precursor metabolites and energy ethanol metabolic process fermentation glycolytic fermentation organic substance metabolic process metabolic process cellular process small molecule metabolic process glycolytic fermentation to ethanol primary alcohol metabolic process glucose metabolic process NADH oxidation NAD metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process nucleobase-containing small molecule metabolic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process phosphorus metabolic process pyridine nucleotide metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process organonitrogen compound metabolic process nucleotide metabolic process NADH metabolic process purine-containing compound metabolic process organic cyclic compound metabolic process organophosphate metabolic process catabolic process small molecule biosynthetic process amino acid metabolic process amino acid catabolic process via Ehrlich pathway biosynthetic process organic hydroxy compound biosynthetic process amino acid catabolic process to alcohol via Ehrlich pathway alcohol biosynthetic process organic substance biosynthetic process amino acid catabolic process organic substance catabolic process	cell periphery plasma membrane membrane cellular anatomical entity intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth C]	IPR013154	Alcohol dehydrogenase-like, N-terminal	Domain
A, B, C [auth D], D [auth C]	IPR011032	GroES-like superfamily	Homologous Superfamily
A, B, C [auth D], D [auth C]	IPR020843	Polyketide synthase, enoylreductase domain	Domain
A, B, C [auth D], D [auth C]	IPR002328	Alcohol dehydrogenase, zinc-type, conserved site	Conserved Site
A, B, C [auth D], D [auth C]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C [auth D], D [auth C]	IPR013149	Alcohol dehydrogenase-like, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.