7NHM

70S ribosome from Staphylococcus aureus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth Z]SCOP2B SuperfamilyRibosomal L27 protein-like8075030 3000539 SCOP2B (2022-06-29)
B [auth P]SCOP2B SuperfamilyRibosomal protein L16p/L10e8076041 3000884 SCOP2B (2022-06-29)
T [auth W]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8086046 3000210 SCOP2B (2022-06-29)
MA [auth 9]SCOP2B SuperfamilyRibosomal protein L368083312 3001346 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilyRibosomal protein L138066059 3001134 SCOP2B (2022-06-29)
L [auth N]SCOP2B Superfamily50S Ribosomal protein L14-like8093892 3000433 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070555 3001045 SCOP2B (2022-06-29)
N [auth Q]SCOP2B SuperfamilyProkaryotic ribosomal protein L178089022 3000995 SCOP2B (2022-06-29)
P [auth S]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082423 3000334 SCOP2B (2022-06-29)
Q [auth T]SCOP2B SuperfamilyRibosomal protein L208094941 3000563 SCOP2B (2022-06-29)
R [auth U]SCOP2B Superfamilyl21p-like8094148 3002005 SCOP2B (2022-06-29)
S [auth V]SCOP2B SuperfamilyRibosomal protein L228076726 3001078 SCOP2B (2022-06-29)
U [auth X]SCOP2 FamilyRibosomal proteins L24p and L21e8103127 4001752 SCOP2 (2022-06-29)
U [auth X]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8103128 3000334 SCOP2 (2022-06-29)
X [auth 2]SCOP2 FamilyRibosomal protein L29 (L29p)8103139 4000600 SCOP2 (2022-06-29)
X [auth 2]SCOP2 SuperfamilyRibosomal protein L29 (L29p)8103140 3000713 SCOP2 (2022-06-29)
Y [auth 3]SCOP2B SuperfamilyRibosomal protein L30p/L7e8076281 3001378 SCOP2B (2022-06-29)
Z [auth 5]SCOP2B SuperfamilyZn-binding ribosomal proteins8081583 3001320 SCOP2B (2022-06-29)
AA [auth 6]SCOP2B SuperfamilyZn-binding ribosomal proteins8075068 3001320 SCOP2B (2022-06-29)
BA [auth 8]SCOP2B SuperfamilyL35p-like8083334 3000790 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083392 3001473 SCOP2B (2022-06-29)
FA [auth h]SCOP2B SuperfamilyRibosomal protein S78066031 3000799 SCOP2B (2022-06-29)
GA [auth k]SCOP2 FamilyRibosomal protein S108103029 4001240 SCOP2 (2022-06-29)
GA [auth k]SCOP2 SuperfamilyRibosomal protein S108103030 3001336 SCOP2 (2022-06-29)
HA [auth l]SCOP2B SuperfamilyTranslational machinery components8099268 3000571 SCOP2B (2022-06-29)
JA [auth p]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8072621 3001284 SCOP2B (2022-06-29)
KA [auth q]SCOP2B SuperfamilyRibosomal protein S168066555 3000680 SCOP2B (2022-06-29)
NA [auth t]SCOP2B SuperfamilyRibosomal protein S198086064 3000686 SCOP2B (2022-06-29)
OA [auth n]SCOP2B SuperfamilyS13-like H2TH domain8099266 3000053 SCOP2B (2022-06-29)
PA [auth j]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082669 3000100 SCOP2B (2022-06-29)
RA [auth i]SCOP2B SuperfamilyRibosomal protein S88079049 3000709 SCOP2B (2022-06-29)
TA [auth g]SCOP2B SuperfamilyRibosomal protein S68066489 3001323 SCOP2B (2022-06-29)
VA [auth m]SCOP2B SuperfamilyNucleic acid-binding proteins8098336 3000135 SCOP2B (2022-06-29)
WA [auth r]SCOP2B SuperfamilyNucleic acid-binding proteins8059272 3000135 SCOP2B (2022-06-29)
XA [auth c]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8099284 3001397 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyTranslational proteins8089152 3000811 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyRibosomal protein L48094174 3001146 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth Z]PF01016e7nhmZ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
B [auth P]PF00252e7nhmP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
F [auth G]PF00181e7nhmG2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
F [auth G]PF03947e7nhmG1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
T [auth W]PF00276e7nhmW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
MA [auth 9]PF00444e7nhm91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
J [auth K]PF00347e7nhmK1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
K [auth M]PF00572e7nhmM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
L [auth N]PF00238e7nhmN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
M [auth O]PF00828e7nhmO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
N [auth Q]PF01196e7nhmQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
O [auth R]PF00861e7nhmR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
P [auth S]PF01245e7nhmS1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
Q [auth T]PF00453e7nhmT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
R [auth U]PF00829e7nhmU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
S [auth V]PF00237e7nhmV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
U [auth X]PF00467,PF17136e7nhmX1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
V [auth Y]PF01386e7nhmY1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
W [auth 1]PF00830e7nhm11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
X [auth 2]PF00831e7nhm21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Y [auth 3]PF00327e7nhm31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
Z [auth 5]PF01783e7nhm51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
AA [auth 6]PF00471e7nhm61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
BA [auth 8]PF01632e7nhm81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
CA [auth 7]PF00468e7nhm71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
DA [auth d]PF00189e7nhmd1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
DA [auth d]PF07650e7nhmd2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
EA [auth e]PF00163,PF01479e7nhme1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
FA [auth h]PF00177e7nhmh1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
GA [auth k]PF00338e7nhmk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
HA [auth l]PF00411e7nhml1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
IA [auth o]PF00253e7nhmo1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
JA [auth p]PF00312e7nhmp1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
KA [auth q]PF00886e7nhmq1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
LA [auth u]PF01649e7nhmu1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
NA [auth t]PF00203e7nhmt1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
OA [auth n]PF00416e7nhmn1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
PA [auth j]PF00380e7nhmj1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
QA [auth f]PF03719e7nhmf2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
QA [auth f]PF00333e7nhmf1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
RA [auth i]PF00410e7nhmi2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
RA [auth i]PF00410e7nhmi1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
SA [auth s]PF01084e7nhms1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
TA [auth g]PF01250e7nhmg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
VA [auth m]PF00164e7nhmm1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
WA [auth r]PF00366e7nhmr1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
XA [auth c]PF00318e7nhmc1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
ZA [auth 4]PF01197e7nhm41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
G [auth H]PF00297e7nhmH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
H [auth I]PF00573e7nhmI1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
I [auth J]PF00281,PF00673e7nhmJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth Z]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
B [auth P]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
F [auth G]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
F [auth G]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
T [auth W]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
MA [auth 9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
J [auth K]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
K [auth M]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L [auth N]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
M [auth O]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
N [auth Q]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth R]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
P [auth S]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth T]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth U]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
S [auth V]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
U [auth X]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
U [auth X]PF00467KOW motif (KOW)KOW motif- Family
V [auth Y]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
W [auth 1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
X [auth 2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Y [auth 3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Z [auth 5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
AA [auth 6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
BA [auth 8]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
CA [auth 7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DA [auth d]PF07650KH domain (KH_2)KH domain- Domain
DA [auth d]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
EA [auth e]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
EA [auth e]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
FA [auth h]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
GA [auth k]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
HA [auth l]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
IA [auth o]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
JA [auth p]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
KA [auth q]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
LA [auth u]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
NA [auth t]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
OA [auth n]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PA [auth j]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
QA [auth f]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
QA [auth f]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
RA [auth i]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
SA [auth s]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
TA [auth g]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
VA [auth m]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
WA [auth r]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
XA [auth c]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
ZA [auth 4]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
G [auth H]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
H [auth I]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
I [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
I [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth Z]50S ribosomal protein L27
B [auth P]50S ribosomal protein L16
F [auth G]50S ribosomal protein L2
T [auth W]50S ribosomal protein L23
MA [auth 9]50S ribosomal protein L36
J [auth K]50S ribosomal protein L6
K [auth M]50S ribosomal protein L13
L [auth N]50S ribosomal protein L14
M [auth O]50S ribosomal protein L15
N [auth Q]50S ribosomal protein L17
O [auth R]50S ribosomal protein L18
P [auth S]50S ribosomal protein L19
Q [auth T]50S ribosomal protein L20
R [auth U]50S ribosomal protein L21
S [auth V]50S ribosomal protein L22
U [auth X]50S ribosomal protein L24
V [auth Y]50S ribosomal protein L25
W [auth 1]50S ribosomal protein L28
X [auth 2]50S ribosomal protein L29
Y [auth 3]50S ribosomal protein L30
Z [auth 5]50S ribosomal protein L32
AA [auth 6]50S ribosomal protein L33 2
BA [auth 8]50S ribosomal protein L35
CA [auth 7]50S ribosomal protein L34
C [auth A]23S rRNA---
DA [auth d]30S ribosomal protein S3
EA [auth e]30S ribosomal protein S4
FA [auth h]30S ribosomal protein S7
GA [auth k]30S ribosomal protein S10
HA [auth l]30S ribosomal protein S11
IA [auth o]30S ribosomal protein S14 type Z
JA [auth p]30S ribosomal protein S15
KA [auth q]30S ribosomal protein S16
LA [auth u]30S ribosomal protein S20
D [auth a]16S rRNA---
NA [auth t]30S ribosomal protein S19
OA [auth n]30S ribosomal protein S13
PA [auth j]30S ribosomal protein S9
QA [auth f]30S ribosomal protein S5
RA [auth i]30S ribosomal protein S8
SA [auth s]30S ribosomal protein S18
TA [auth g]30S ribosomal protein S6
UA [auth b]RNA (5'-R(P*GP*GP*AP*GP*GP*UP*NP*NP*NP*NP*NP*NP*AP*UP*G)-3')---
VA [auth m]30S ribosomal protein S12
WA [auth r]30S ribosomal protein S17
E [auth B]5S rRNA---
XA [auth c]30S ribosomal protein S2
YA [auth D]tRNA-fMet---
ZA [auth 4]50S ribosomal protein L31 type B
G [auth H]50S ribosomal protein L3
H [auth I]50S ribosomal protein L4
I [auth J]50S ribosomal protein L5

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth Z]IPR001684Large ribosomal subunit protein bL27Family
A [auth Z]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
B [auth P]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
B [auth P]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
B [auth P]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
B [auth P]IPR016180Large ribosomal subunit protein uL16 domainDomain
B [auth P]IPR047873Large ribosomal subunit protein uL16Family
F [auth G]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth G]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth G]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth G]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
F [auth G]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
F [auth G]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth G]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth G]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth G]IPR002171Large ribosomal subunit protein uL2Family
T [auth W]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth W]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth W]IPR013025Large ribosomal subunit protein uL23-likeFamily
MA [auth 9]IPR000473Large ribosomal subunit protein bL36Family
MA [auth 9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
J [auth K]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
J [auth K]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
J [auth K]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth K]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
J [auth K]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
K [auth M]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K [auth M]IPR005822Large ribosomal subunit protein uL13Family
K [auth M]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth M]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
L [auth N]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
L [auth N]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth N]IPR000218Large ribosomal subunit protein uL14Family
L [auth N]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
M [auth O]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
M [auth O]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth O]IPR030878Large ribosomal subunit protein uL15Family
M [auth O]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
M [auth O]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
N [auth Q]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth Q]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
N [auth Q]IPR000456Large ribosomal subunit protein bL17Family
O [auth R]IPR005484Large ribosomal subunit protein uL18Family
O [auth R]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
P [auth S]IPR001857Large ribosomal subunit protein bL19Family
P [auth S]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth S]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth T]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth T]IPR005813Large ribosomal subunit protein bL20Family
R [auth U]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth U]IPR001787Large ribosomal subunit protein bL21Family
R [auth U]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth V]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
S [auth V]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth V]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth V]IPR001063Large ribosomal subunit protein uL22Family
S [auth V]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
U [auth X]IPR003256Large ribosomal subunit protein uL24Family
U [auth X]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth X]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth X]IPR005824KOWDomain
U [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth X]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth Y]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth Y]IPR001021Ribosomal protein bL25, long-formFamily
V [auth Y]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth Y]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
V [auth Y]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
V [auth Y]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
W [auth 1]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
W [auth 1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
W [auth 1]IPR026569Large ribosomal subunit protein bL28Family
W [auth 1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
X [auth 2]IPR001854Large ribosomal subunit protein uL29Family
X [auth 2]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Y [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Y [auth 3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
Y [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth 5]IPR002677Large ribosomal subunit protein bL32Family
Z [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 5]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
AA [auth 6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth 6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
AA [auth 6]IPR001705Large ribosomal subunit protein bL33Family
AA [auth 6]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
BA [auth 8]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 8]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
BA [auth 8]IPR001706Large ribosomal subunit protein bL35Family
BA [auth 8]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth 7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth 7]IPR000271Large ribosomal subunit protein bL34Family
DA [auth d]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
DA [auth d]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
DA [auth d]IPR004087K Homology domainDomain
DA [auth d]IPR004044K Homology domain, type 2Domain
DA [auth d]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
DA [auth d]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
DA [auth d]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
DA [auth d]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
EA [auth e]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EA [auth e]IPR002942RNA-binding S4 domainDomain
EA [auth e]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EA [auth e]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EA [auth e]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
EA [auth e]IPR022801Small ribosomal subunit protein uS4Family
FA [auth h]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FA [auth h]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FA [auth h]IPR000235Small ribosomal subunit protein uS7Family
FA [auth h]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
FA [auth h]IPR023798Small ribosomal subunit protein uS7 domainDomain
GA [auth k]IPR001848Small ribosomal subunit protein uS10Family
GA [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
GA [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
GA [auth k]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
HA [auth l]IPR001971Small ribosomal subunit protein uS11Family
HA [auth l]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
HA [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HA [auth l]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
IA [auth o]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
IA [auth o]IPR001209Small ribosomal subunit protein uS14Family
IA [auth o]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IA [auth o]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
JA [auth p]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
JA [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
JA [auth p]IPR000589Small ribosomal subunit protein uS15Family
KA [auth q]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
KA [auth q]IPR000307Small ribosomal subunit protein bS16Family
LA [auth u]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
LA [auth u]IPR002583Small ribosomal subunit protein bS20Family
NA [auth t]IPR002222Small ribosomal subunit protein uS19Family
NA [auth t]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
NA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
NA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
OA [auth n]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OA [auth n]IPR001892Small ribosomal subunit protein uS13Family
OA [auth n]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OA [auth n]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OA [auth n]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
PA [auth j]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
PA [auth j]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
PA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PA [auth j]IPR000754Small ribosomal subunit protein uS9Family
PA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
QA [auth f]IPR000851Small ribosomal subunit protein uS5Family
QA [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
QA [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
QA [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
QA [auth f]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
QA [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth i]IPR000630Small ribosomal subunit protein uS8Family
RA [auth i]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
RA [auth i]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
SA [auth s]IPR001648Small ribosomal subunit protein bS18Family
SA [auth s]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
SA [auth s]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
TA [auth g]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
TA [auth g]IPR000529Small ribosomal subunit protein bS6Family
TA [auth g]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
TA [auth g]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
TA [auth g]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
VA [auth m]IPR006032Small ribosomal subunit protein uS12Family
VA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth m]IPR005679Ribosomal protein uS12, bacterial-typeFamily
WA [auth r]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
WA [auth r]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
WA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth r]IPR000266Small ribosomal subunit protein uS17Family
XA [auth c]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
XA [auth c]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
XA [auth c]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
XA [auth c]IPR001865Small ribosomal subunit protein uS2Family
ZA [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth 4]IPR027493Large ribosomal subunit protein bL31 type BFamily
ZA [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
G [auth H]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth H]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
G [auth H]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth H]IPR000597Large ribosomal subunit protein uL3Family
H [auth I]IPR013005Large ribosomal subunit protein uL4-likeFamily
H [auth I]IPR002136Large ribosomal subunit protein uL4Family
H [auth I]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
I [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
I [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
I [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
I [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
I [auth J]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
I [auth J]IPR002132Large ribosomal subunit protein uL5Family