7NHL

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
MSCOP2B SuperfamilyRibosomal protein L138066059 3001134 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyRibosomal protein L48094174 3001146 SCOP2B (2022-06-29)
NSCOP2B Superfamily50S Ribosomal protein L14-like8093892 3000433 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRibosomal proteins L15p and L18e8070555 3001045 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyProkaryotic ribosomal protein L178089022 3000995 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082423 3000334 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilyRibosomal protein L208094941 3000563 SCOP2B (2022-06-29)
T [auth U]SCOP2B Superfamilyl21p-like8094148 3002005 SCOP2B (2022-06-29)
U [auth V]SCOP2B SuperfamilyRibosomal protein L228076726 3001078 SCOP2B (2022-06-29)
V [auth W]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8086046 3000210 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082503 3000334 SCOP2B (2022-06-29)
Z [auth 2]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8094170 3000713 SCOP2B (2022-06-29)
AA [auth 3]SCOP2B SuperfamilyRibosomal protein L30p/L7e8076281 3001378 SCOP2B (2022-06-29)
BA [auth 6]SCOP2B SuperfamilyZn-binding ribosomal proteins8075068 3001320 SCOP2B (2022-06-29)
CA [auth 8]SCOP2B SuperfamilyL35p-like8083334 3000790 SCOP2B (2022-06-29)
C [auth Z]SCOP2B SuperfamilyRibosomal L27 protein-like8075030 3000539 SCOP2B (2022-06-29)
FA [auth e]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083392 3001473 SCOP2B (2022-06-29)
GA [auth h]SCOP2B SuperfamilyRibosomal protein S78066031 3000799 SCOP2B (2022-06-29)
HA [auth k]SCOP2B SuperfamilyRibosomal protein S108103030 3001336 SCOP2B (2022-06-29)
IA [auth l]SCOP2B SuperfamilyTranslational machinery components8099268 3000571 SCOP2B (2022-06-29)
KA [auth p]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8072621 3001284 SCOP2B (2022-06-29)
LA [auth q]SCOP2B SuperfamilyRibosomal protein S168066555 3000680 SCOP2B (2022-06-29)
D [auth P]SCOP2B SuperfamilyRibosomal protein L16p/L10e8076041 3000884 SCOP2B (2022-06-29)
NA [auth 9]SCOP2B SuperfamilyRibosomal protein L368083312 3001346 SCOP2B (2022-06-29)
OA [auth t]SCOP2B SuperfamilyRibosomal protein S198086064 3000686 SCOP2B (2022-06-29)
PA [auth n]SCOP2B SuperfamilyS13-like H2TH domain8099266 3000053 SCOP2B (2022-06-29)
QA [auth j]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082669 3000100 SCOP2B (2022-06-29)
SA [auth i]SCOP2B SuperfamilyRibosomal protein S88079049 3000709 SCOP2B (2022-06-29)
UA [auth g]SCOP2B SuperfamilyRibosomal protein S68066489 3001323 SCOP2B (2022-06-29)
WA [auth m]SCOP2B SuperfamilyNucleic acid-binding proteins8098336 3000135 SCOP2B (2022-06-29)
XA [auth r]SCOP2B SuperfamilyNucleic acid-binding proteins8059272 3000135 SCOP2B (2022-06-29)
YA [auth c]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8099284 3001397 SCOP2B (2022-06-29)
AB [auth 5]SCOP2 FamilyRibosomal protein L32p8103027 4000508 SCOP2 (2022-06-29)
AB [auth 5]SCOP2 SuperfamilyZn-binding ribosomal proteins8103028 3001320 SCOP2 (2022-06-29)
I [auth H]SCOP2B SuperfamilyTranslational proteins8089152 3000811 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
MRibosomal_L13e7nhlM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth I]Ribosomal_L4e7nhlI1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
K [auth J]Ribosomal_L5_Ce7nhlJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
L [auth K]Ribosomal_L6e7nhlK2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
L [auth K]Ribosomal_L6_1e7nhlK1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
NRibosomal_L14e7nhlN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
ORibosomal_L27Ae7nhlO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
P [auth Q]Ribosomal_L17_1e7nhlQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
Q [auth R]Ribosomal_L18pe7nhlR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
R [auth S]Ribosomal_L19e7nhlS1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
S [auth T]Ribosomal_L20e7nhlT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
T [auth U]Ribosomal_L21pe7nhlU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
U [auth V]Ribosomal_L22e7nhlV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
V [auth W]Ribosomal_L23_2e7nhlW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
W [auth X]ribosomal_L24_1e7nhlX1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
X [auth Y]Ribosomal_L25pe7nhlY1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
Y [auth 1]Ribosomal_L28e7nhl11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
Z [auth 2]Ribosomal_L29e7nhl21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
AA [auth 3]Ribosomal_L30e7nhl31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
BA [auth 6]Ribosomal_L33e7nhl61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CA [auth 8]Ribosomal_L35pe7nhl81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
C [auth Z]Ribosomal_L27e7nhlZ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
DA [auth 7]Ribosomal_L34e7nhl71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
EA [auth d]Ribosomal_S3_Ce7nhld1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
EA [auth d]KH_2_1e7nhld2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
FA [auth e]S4e7nhle1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
GA [auth h]Ribosomal_S7_1e7nhlh1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
HA [auth k]Ribosomal_S10e7nhlk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
IA [auth l]Ribosomal_S11e7nhll1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
JA [auth o]Ribosomal_S14e7nhlo1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
KA [auth p]Ribosomal_S15_1e7nhlp1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
LA [auth q]Ribosomal_S16_1e7nhlq1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
MA [auth u]Ribosomal_S20pe7nhlu1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
D [auth P]Ribosomal_L16e7nhlP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
NA [auth 9]Ribosomal_L36e7nhl91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
OA [auth t]Ribosomal_S19e7nhlt1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
PA [auth n]Ribosomal_S13_1e7nhln1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
QA [auth j]Ribosomal_S9e7nhlj1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
RA [auth f]Ribosomal_S5_Ce7nhlf2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
RA [auth f]Ribosomal_S5e7nhlf1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
SA [auth i]Ribosomal_S8_Ne7nhli2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
SA [auth i]Ribosomal_S8_Ce7nhli1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
TA [auth s]Ribosomal_S18e7nhls1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
UA [auth g]Ribosomal_S6e7nhlg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
WA [auth m]Ribosom_S12_S23e7nhlm1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
XA [auth r]Ribosomal_S17_1e7nhlr1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
YA [auth c]Ribosomal_S2e7nhlc1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
ZA [auth 4]Ribosomal_L31e7nhl41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AB [auth 5]Ribosomal_L32pe7nhl51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
H [auth G]Ribosomal_L2_1e7nhlG2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
H [auth G]Ribosomal_L2_Ce7nhlG1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
I [auth H]Ribosomal_L3e7nhlH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
A [auth 0]PF12848ABC transporter (ABC_tran_Xtn)ABC transporterThis domain is an extension of some members of Pfam:PF00005 and other ABC-transporter families.Domain
A [auth 0]PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.
Domain
J [auth I]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
K [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
K [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
L [auth K]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
P [auth Q]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
Q [auth R]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
R [auth S]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
S [auth T]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
T [auth U]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
U [auth V]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
V [auth W]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
W [auth X]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
W [auth X]PF00467KOW motif (KOW)KOW motif- Family
X [auth Y]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
Y [auth 1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Z [auth 2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AA [auth 3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
BA [auth 6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CA [auth 8]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
C [auth Z]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
DA [auth 7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
EA [auth d]PF07650KH domain (KH_2)KH domain- Domain
EA [auth d]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
FA [auth e]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
FA [auth e]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
GA [auth h]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
HA [auth k]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
IA [auth l]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JA [auth o]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
KA [auth p]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
LA [auth q]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
MA [auth u]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
D [auth P]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
NA [auth 9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
OA [auth t]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PA [auth n]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
QA [auth j]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RA [auth f]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
RA [auth f]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
SA [auth i]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
TA [auth s]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
UA [auth g]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
WA [auth m]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
XA [auth r]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
YA [auth c]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
ZA [auth 4]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AB [auth 5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
H [auth G]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
H [auth G]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
I [auth H]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
50S ribosomal protein L13
A [auth 0]Lincosamide-streptogramin A resistance protein - -
J [auth I]50S ribosomal protein L4
K [auth J]50S ribosomal protein L5
L [auth K]50S ribosomal protein L6
50S ribosomal protein L14
50S ribosomal protein L15
P [auth Q]50S ribosomal protein L17
Q [auth R]50S ribosomal protein L18
R [auth S]50S ribosomal protein L19
S [auth T]50S ribosomal protein L20
B [auth D]P-tRNA fMet---
T [auth U]50S ribosomal protein L21
U [auth V]50S ribosomal protein L22
V [auth W]50S ribosomal protein L23
W [auth X]50S ribosomal protein L24
X [auth Y]50S ribosomal protein L25
Y [auth 1]50S ribosomal protein L28
Z [auth 2]50S ribosomal protein L29
AA [auth 3]50S ribosomal protein L30
BA [auth 6]50S ribosomal protein L33 2
CA [auth 8]50S ribosomal protein L35
C [auth Z]50S ribosomal protein L27
DA [auth 7]50S ribosomal protein L34
EA [auth d]30S ribosomal protein S3
FA [auth e]30S ribosomal protein S4
GA [auth h]30S ribosomal protein S7
HA [auth k]30S ribosomal protein S10
IA [auth l]30S ribosomal protein S11
JA [auth o]30S ribosomal protein S14 type Z
KA [auth p]30S ribosomal protein S15
LA [auth q]30S ribosomal protein S16
MA [auth u]30S ribosomal protein S20
D [auth P]50S ribosomal protein L16
NA [auth 9]50S ribosomal protein L36
OA [auth t]30S ribosomal protein S19
PA [auth n]30S ribosomal protein S13
QA [auth j]30S ribosomal protein S9
RA [auth f]30S ribosomal protein S5
SA [auth i]30S ribosomal protein S8
TA [auth s]30S ribosomal protein S18
UA [auth g]30S ribosomal protein S6
VA [auth b]RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*G)-3')---
WA [auth m]30S ribosomal protein S12
E [auth A]23S rRNA---
XA [auth r]30S ribosomal protein S17
YA [auth c]30S ribosomal protein S2
ZA [auth 4]50S ribosomal protein L31 type B
AB [auth 5]50S ribosomal protein L32
F [auth a]16S rRNA---
G [auth B]5S rRNA---
H [auth G]50S ribosomal protein L2
I [auth H]50S ribosomal protein L3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
A [auth 0]IPR003593AAA+ ATPase domainDomain
A [auth 0]IPR032781ABC-transporter extension domainDomain
A [auth 0]IPR003439ABC transporter-like, ATP-binding domainDomain
A [auth 0]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
J [auth I]IPR013005Large ribosomal subunit protein uL4-likeFamily
J [auth I]IPR002136Large ribosomal subunit protein uL4Family
J [auth I]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
K [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
K [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
K [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
K [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
K [auth J]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
K [auth J]IPR002132Large ribosomal subunit protein uL5Family
L [auth K]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth K]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth K]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth K]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
L [auth K]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
P [auth Q]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
P [auth Q]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
P [auth Q]IPR000456Large ribosomal subunit protein bL17Family
Q [auth R]IPR005484Large ribosomal subunit protein uL18Family
Q [auth R]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
R [auth S]IPR001857Large ribosomal subunit protein bL19Family
R [auth S]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
R [auth S]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
R [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth T]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
S [auth T]IPR005813Large ribosomal subunit protein bL20Family
T [auth U]IPR028909Large ribosomal subunit protein bL21-likeFamily
T [auth U]IPR001787Large ribosomal subunit protein bL21Family
T [auth U]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
U [auth V]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
U [auth V]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth V]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth V]IPR001063Large ribosomal subunit protein uL22Family
U [auth V]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
V [auth W]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth W]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth W]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth X]IPR003256Large ribosomal subunit protein uL24Family
W [auth X]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth X]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth X]IPR005824KOWDomain
W [auth X]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth X]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
X [auth Y]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
X [auth Y]IPR001021Ribosomal protein bL25, long-formFamily
X [auth Y]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth Y]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
X [auth Y]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
X [auth Y]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
Y [auth 1]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
Y [auth 1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Y [auth 1]IPR026569Large ribosomal subunit protein bL28Family
Y [auth 1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Z [auth 2]IPR001854Large ribosomal subunit protein uL29Family
Z [auth 2]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
AA [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AA [auth 3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
AA [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BA [auth 6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth 6]IPR001705Large ribosomal subunit protein bL33Family
BA [auth 6]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth 8]IPR021137Large ribosomal subunit protein bL35-likeFamily
CA [auth 8]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CA [auth 8]IPR001706Large ribosomal subunit protein bL35Family
CA [auth 8]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
C [auth Z]IPR001684Large ribosomal subunit protein bL27Family
C [auth Z]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
DA [auth 7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
DA [auth 7]IPR000271Large ribosomal subunit protein bL34Family
EA [auth d]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
EA [auth d]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
EA [auth d]IPR004087K Homology domainDomain
EA [auth d]IPR004044K Homology domain, type 2Domain
EA [auth d]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
EA [auth d]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
EA [auth d]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
EA [auth d]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
FA [auth e]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
FA [auth e]IPR002942RNA-binding S4 domainDomain
FA [auth e]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
FA [auth e]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
FA [auth e]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
FA [auth e]IPR022801Small ribosomal subunit protein uS4Family
GA [auth h]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
GA [auth h]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
GA [auth h]IPR000235Small ribosomal subunit protein uS7Family
GA [auth h]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
GA [auth h]IPR023798Small ribosomal subunit protein uS7 domainDomain
HA [auth k]IPR001848Small ribosomal subunit protein uS10Family
HA [auth k]IPR027486Small ribosomal subunit protein uS10 domainDomain
HA [auth k]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
HA [auth k]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
IA [auth l]IPR001971Small ribosomal subunit protein uS11Family
IA [auth l]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
IA [auth l]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IA [auth l]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JA [auth o]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
JA [auth o]IPR001209Small ribosomal subunit protein uS14Family
JA [auth o]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
JA [auth o]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
KA [auth p]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
KA [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KA [auth p]IPR000589Small ribosomal subunit protein uS15Family
LA [auth q]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
LA [auth q]IPR000307Small ribosomal subunit protein bS16Family
MA [auth u]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
MA [auth u]IPR002583Small ribosomal subunit protein bS20Family
D [auth P]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
D [auth P]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
D [auth P]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
D [auth P]IPR016180Large ribosomal subunit protein uL16 domainDomain
D [auth P]IPR047873Large ribosomal subunit protein uL16Family
NA [auth 9]IPR000473Large ribosomal subunit protein bL36Family
NA [auth 9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
OA [auth t]IPR002222Small ribosomal subunit protein uS19Family
OA [auth t]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
OA [auth t]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
OA [auth t]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
PA [auth n]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PA [auth n]IPR001892Small ribosomal subunit protein uS13Family
PA [auth n]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
PA [auth n]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
PA [auth n]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
QA [auth j]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth j]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
QA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth j]IPR000754Small ribosomal subunit protein uS9Family
QA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth f]IPR000851Small ribosomal subunit protein uS5Family
RA [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
RA [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
RA [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
RA [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
RA [auth f]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
RA [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
SA [auth i]IPR000630Small ribosomal subunit protein uS8Family
SA [auth i]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
SA [auth i]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
TA [auth s]IPR001648Small ribosomal subunit protein bS18Family
TA [auth s]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
TA [auth s]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
UA [auth g]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
UA [auth g]IPR000529Small ribosomal subunit protein bS6Family
UA [auth g]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
UA [auth g]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
UA [auth g]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
WA [auth m]IPR006032Small ribosomal subunit protein uS12Family
WA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth m]IPR005679Ribosomal protein uS12, bacterial-typeFamily
XA [auth r]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
XA [auth r]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
XA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
XA [auth r]IPR000266Small ribosomal subunit protein uS17Family
YA [auth c]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
YA [auth c]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
YA [auth c]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
YA [auth c]IPR001865Small ribosomal subunit protein uS2Family
ZA [auth 4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth 4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth 4]IPR027493Large ribosomal subunit protein bL31 type BFamily
ZA [auth 4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth 5]IPR002677Large ribosomal subunit protein bL32Family
AB [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth 5]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
H [auth G]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
H [auth G]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth G]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth G]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
H [auth G]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
H [auth G]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth G]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
H [auth G]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
H [auth G]IPR002171Large ribosomal subunit protein uL2Family
I [auth H]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
I [auth H]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
I [auth H]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
I [auth H]IPR000597Large ribosomal subunit protein uL3Family