7MUC | pdb_00007muc

Legionella pneumophila Dot/Icm T4SS C1 Reconstruction

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
TE [auth LL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
TD [auth JL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
TC [auth HL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
TB [auth FL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
TA [auth DL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
T [auth BL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GF [auth ML]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GE [auth KL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GD [auth IL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GC [auth GL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GB [auth EL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
GA [auth CL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
G [auth AL]	SCOP2B Superfamily	OmpA-like	8074167	3001650	SCOP2B (2022-06-29)
SE [auth LK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
SD [auth JK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
SC [auth HK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
SB [auth FK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
SA [auth DK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
S [auth BK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FF [auth MK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FE [auth KK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FD [auth IK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FC [auth GK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FB [auth EK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
FA [auth CK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)
F [auth AK]	SCOP2B Superfamily	OmpA-like	8098176	3001650	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
TE [auth LL]	Secretin_N	e7mucLL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
TD [auth JL]	Secretin_N	e7mucJL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
TC [auth HL]	Secretin_N	e7mucHL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
TB [auth FL]	Secretin_N	e7mucFL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
TA [auth DL]	Secretin_N	e7mucDL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
T [auth BL]	Secretin_N	e7mucBL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GF [auth ML]	Secretin_N	e7mucML1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GE [auth KL]	Secretin_N	e7mucKL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GD [auth IL]	Secretin_N	e7mucIL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GC [auth GL]	Secretin_N	e7mucGL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GB [auth EL]	Secretin_N	e7mucEL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
GA [auth CL]	Secretin_N	e7mucCL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
G [auth AL]	Secretin_N	e7mucAL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.1)
SE [auth LK]	Glyco_transf_41	e7mucLK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
SD [auth JK]	Glyco_transf_41	e7mucJK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
SC [auth HK]	Glyco_transf_41	e7mucHK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
SB [auth FK]	Glyco_transf_41	e7mucFK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
SA [auth DK]	Glyco_transf_41	e7mucDK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
S [auth BK]	Glyco_transf_41	e7mucBK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FF [auth MK]	Glyco_transf_41	e7mucMK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FE [auth KK]	Glyco_transf_41	e7mucKK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FD [auth IK]	Glyco_transf_41	e7mucIK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FC [auth GK]	Glyco_transf_41	e7mucGK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FB [auth EK]	Glyco_transf_41	e7mucEK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
FA [auth CK]	Glyco_transf_41	e7mucCK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)
F [auth AK]	Glyco_transf_41	e7mucAK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], GE [auth KL], GF [auth ML], T [auth BL], TA [auth DL], TB [auth FL], TC [auth HL], TD [auth JL], TE [auth LL]	PF00691	OmpA family (OmpA)	OmpA family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth AN], IA [auth CN], IB [auth EN], IC [auth GN], ID [auth IN], I [auth AN], IA [auth CN], IB [auth EN], IC [auth GN], ID [auth IN], IE [auth KN], IF [auth MN], V [auth BN], VA [auth DN], VB [auth FN], VC [auth HN], VD [auth JN], VE [auth LN]	Neurogenic locus notch	-	-	-
H [auth AM], HA [auth CM], HB [auth EM], HC [auth GM], HD [auth IM], H [auth AM], HA [auth CM], HB [auth EM], HC [auth GM], HD [auth IM], HE [auth KM], HF [auth MM], U [auth BM], UA [auth DM], UB [auth FM], UC [auth HM], UD [auth JM], UE [auth LM]	DUF2807 domain-containing protein	-	-	-
G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], GE [auth KL], GF [auth ML], T [auth BL], TA [auth DL], TB [auth FL], TC [auth HL], TD [auth JL], TE [auth LL]	Outer membrane protein, OmpA family protein	-	-	cellular anatomical structure membrane
F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], FE [auth KK], FF [auth MK], S [auth BK], SA [auth DK], SB [auth FK], SC [auth HK], SD [auth JK], SE [auth LK]	Inner membrane lipoprotein YiaD	-	-	cellular anatomical structure membrane
BG [auth YH], E [auth AH], EA [auth CH], EB [auth EH], EC [auth GH], BG [auth YH], E [auth AH], EA [auth CH], EB [auth EH], EC [auth GH], ED [auth IH], EE [auth KH], EF [auth MH], FG [auth ZH], PF [auth VH], R [auth BH], RA [auth DH], RB [auth FH], RC [auth HH], RD [auth JH], RE [auth LH], TF [auth WH], XF [auth XH]	Type IV secretion protein IcmK	-	-	-
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IcmE protein	-	-	cellular anatomical structure membrane
C [auth AF], CA [auth CF], CB [auth EF], CC [auth GF], CD [auth IF], C [auth AF], CA [auth CF], CB [auth EF], CC [auth GF], CD [auth IF], CE [auth KF], CF [auth MF], DG [auth ZF], M [auth Af], MA [auth Cf], MB [auth Ef], MC [auth Gf], MD [auth If], ME [auth Kf], MF [auth Mf], NF [auth VF], P [auth BF], PA [auth DF], PB [auth FF], PC [auth HF], PD [auth JF], PE [auth LF], RF [auth WF], VF [auth XF], Z [auth Bf], ZA [auth Df], ZB [auth Ff], ZC [auth Hf], ZD [auth Jf], ZE [auth Lf], ZF [auth YF]	DotF	-	-	-
B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], BE [auth KD], BF [auth MD], L [auth Ad], LA [auth Cd], LB [auth Ed], LC [auth Gd], LD [auth Id], LE [auth Kd], LF [auth Md], O [auth BD], OA [auth DD], OB [auth FD], OC [auth HD], OD [auth JD], OE [auth LD], Y [auth Bd], YA [auth Dd], YB [auth Fd], YC [auth Hd], YD [auth Jd], YE [auth Ld]	DotD	-	-	-
CG [auth YX], GG [auth ZX], K [auth AX], KA [auth CX], KB [auth EX], CG [auth YX], GG [auth ZX], K [auth AX], KA [auth CX], KB [auth EX], KC [auth GX], KD [auth IX], KE [auth KX], KF [auth MX], QF [auth VX], UF [auth WX], X [auth BX], XA [auth DX], XB [auth FX], XC [auth HX], XD [auth JX], XE [auth LX], YF [auth XX]	Unknown protein fragment	-	-	-
J [auth AU], JA [auth CU], JB [auth EU], JC [auth GU], JD [auth IU], J [auth AU], JA [auth CU], JB [auth EU], JC [auth GU], JD [auth IU], JE [auth KU], JF [auth MU], W [auth BU], WA [auth DU], WB [auth FU], WC [auth HU], WD [auth JU], WE [auth LU]	Unknown protein fragment	-	-	-
A [auth AC], AA [auth CC], AB [auth EC], AC [auth GC], AD [auth IC], A [auth AC], AA [auth CC], AB [auth EC], AC [auth GC], AD [auth IC], AE [auth KC], AF [auth MC], N [auth BC], NA [auth DC], NB [auth FC], NC [auth HC], ND [auth JC], NE [auth LC]	DotC	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], GE [auth KL], GF [auth ML], T [auth BL], TA [auth DL], TB [auth FL], TC [auth HL], TD [auth JL], TE [auth LL]	IPR006665	OmpA-like domain	Domain
G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], GE [auth KL], GF [auth ML], T [auth BL], TA [auth DL], TB [auth FL], TC [auth HL], TD [auth JL], TE [auth LL]	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], G [auth AL], GA [auth CL], GB [auth EL], GC [auth GL], GD [auth IL], GE [auth KL], GF [auth ML], T [auth BL], TA [auth DL], TB [auth FL], TC [auth HL], TD [auth JL], TE [auth LL]	IPR036737	OmpA-like domain superfamily	Homologous Superfamily
F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], FE [auth KK], FF [auth MK], S [auth BK], SA [auth DK], SB [auth FK], SC [auth HK], SD [auth JK], SE [auth LK]	IPR006665	OmpA-like domain	Domain
F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], FE [auth KK], FF [auth MK], S [auth BK], SA [auth DK], SB [auth FK], SC [auth HK], SD [auth JK], SE [auth LK]	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], F [auth AK], FA [auth CK], FB [auth EK], FC [auth GK], FD [auth IK], FE [auth KK], FF [auth MK], S [auth BK], SA [auth DK], SB [auth FK], SC [auth HK], SD [auth JK], SE [auth LK]	IPR036737	OmpA-like domain superfamily	Homologous Superfamily
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IPR053285	Thylakoid lumenal pentapeptide repeat protein	Family
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IPR042217	Type IV secretion system, VirB10/TrbI	Homologous Superfamily
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IPR057481	Decapeptide repeat	Repeat
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IPR049855	DotG/IcmE-like, C-terminal domain	Domain
AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], AG [auth YG], D [auth AG], DA [auth CG], DB [auth EG], DC [auth GG], DD [auth IG], DE [auth KG], DF [auth MG], EG [auth ZG], OF [auth VG], Q [auth BG], QA [auth DG], QB [auth FG], QC [auth HG], QD [auth JG], QE [auth LG], SF [auth WG], WF [auth XG]	IPR005498	Type IV secretion system, VirB10/TraB/TrbI	Family
B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], BE [auth KD], BF [auth MD], L [auth Ad], LA [auth Cd], LB [auth Ed], LC [auth Gd], LD [auth Id], LE [auth Kd], LF [auth Md], O [auth BD], OA [auth DD], OB [auth FD], OC [auth HD], OD [auth JD], OE [auth LD], Y [auth Bd], YA [auth Dd], YB [auth Fd], YC [auth Hd], YD [auth Jd], YE [auth Ld]	IPR038140	DotD superfamily	Homologous Superfamily
B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], B [auth AD], BA [auth CD], BB [auth ED], BC [auth GD], BD [auth ID], BE [auth KD], BF [auth MD], L [auth Ad], LA [auth Cd], LB [auth Ed], LC [auth Gd], LD [auth Id], LE [auth Kd], LF [auth Md], O [auth BD], OA [auth DD], OB [auth FD], OC [auth HD], OD [auth JD], OE [auth LD], Y [auth Bd], YA [auth Dd], YB [auth Fd], YC [auth Hd], YD [auth Jd], YE [auth Ld]	IPR031817	DotD protein	Family
A [auth AC], AA [auth CC], AB [auth EC], AC [auth GC], AD [auth IC], A [auth AC], AA [auth CC], AB [auth EC], AC [auth GC], AD [auth IC], AE [auth KC], AF [auth MC], N [auth BC], NA [auth DC], NB [auth FC], NC [auth HC], ND [auth JC], NE [auth LC]	IPR031618	Putative type IV secretory system protein	Family