7MPI

Stm1 bound vacant 80S structure isolated from cbf5-D95A


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth BB]SCOP2B SuperfamilyRibosomal S3Ae-like8053211 3002166 SCOP2B (2022-06-29)
F [auth BF]SCOP2B SuperfamilyRibosomal protein S78065993 3000799 SCOP2B (2022-06-29)
G [auth BG]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
K [auth BK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055713 3000034 SCOP2B (2022-06-29)
L [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
L [auth BL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
N [auth BN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
N [auth BN]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
P [auth BP]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
Q [auth BQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
S [auth BS]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
U [auth BU]SCOP2B SuperfamilyRibosomal protein S108098648 3001336 SCOP2B (2022-06-29)
V [auth BV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
AA [auth Ba]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053149 3000068 SCOP2B (2022-06-29)
CA [auth Bc]SCOP2B SuperfamilyNucleic acid-binding proteins8063430 3000135 SCOP2B (2022-06-29)
DA [auth Bd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)
EA [auth Be]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
NA [auth AB]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
PA [auth AD]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
QA [auth AE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
VA [auth AJ]SCOP2B SuperfamilyRL5-like8073884 3001709 SCOP2B (2022-06-29)
WA [auth AL]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
YA [auth AN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
AB [auth AP]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
CB [auth AR]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
FB [auth AU]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
GB [auth AV]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
IB [auth AX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
JB [auth AY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
KB [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
MB [auth Ab]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
TB [auth Ai]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
UB [auth Aj]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
VB [auth Ak]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
AC [auth Ap]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
A [auth BA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2B (2022-06-29)
M [auth BM]SCOP2B SuperfamilyL30e-like8096946 3001739 SCOP2B (2022-06-29)
O [auth BO]SCOP2B SuperfamilyTranslational machinery components8095805 3000571 SCOP2B (2022-06-29)
W [auth BW]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)
Z [auth BZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2B (2022-06-29)
OA [auth AC]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
OA [auth AC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
RA [auth AF]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
RA [auth AF]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
SA [auth AG]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
UA [auth AI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
E [auth BE]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
E [auth BE]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
E [auth BE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
ZA [auth AO]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
BB [auth AQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
LB [auth Aa]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
NB [auth Ac]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
QB [auth Af]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
RB [auth Ag]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
WB [auth Al]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
I [auth BI]SCOP2B Superfamily50S Ribosomal protein L14-like8053083 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth BB]Ribosomal_S3Ae_Ne7mpiBB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
B [auth BB]Ribosomal_S3Ae_Ce7mpiBB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
D [auth BD]Ribosomal_S3_Ce7mpiBD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
D [auth BD]KH_2_3e7mpiBD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
F [auth BF]Ribosomal_S7_1e7mpiBF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth BG]Ribosomal_S6ee7mpiBG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
H [auth BH]Ribosomal_S7e_Ne7mpiBH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
H [auth BH]Ribosomal_S7e_C_2e7mpiBH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
J [auth BJ]S4e7mpiBJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
K [auth BK]S10_plectine7mpiBK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
L [auth BL]Ribosomal_S17_1e7mpiBL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
N [auth BN]Ribosomal_S13_Ne7mpiBN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
N [auth BN]Ribosomal_S15_2e7mpiBN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
P [auth BP]Ribosomal_S19e7mpiBP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
Q [auth BQ]Ribosomal_S9e7mpiBQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
S [auth BS]Ribosomal_S13e7mpiBS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
T [auth BT]Ribosomal_S19ee7mpiBT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
U [auth BU]Ribosomal_S10_1e7mpiBU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
V [auth BV]Ribosomal_S21ee7mpiBV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
X [auth BX]Ribosom_S12_S23e7mpiBX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
Y [auth BY]Ribosomal_S24ee7mpiBY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
AA [auth Ba]Ribosomal_S26ee7mpiBa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
BA [auth Bb]Ribosomal_S27ee7mpiBb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
CA [auth Bc]Ribosomal_S28ee7mpiBc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
DA [auth Bd]Ribosomal_S14_2e7mpiBd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
EA [auth Be]Ribosomal_S30e7mpiBe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
FA [auth Bf]Ribosomal_S27e7mpiBf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
MA [auth AA]Ribosomal_L2_1e7mpiAA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
MA [auth AA]Ribosomal_L2_C_2e7mpiAA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
NA [auth AB]Ribosomal_L3e7mpiAB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
PA [auth AD]Ribosomal_L5ee7mpiAD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
QA [auth AE]Ribosomal_L6ee7mpiAE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
TA [auth AH]Ribosomal_L6_2e7mpiAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
TA [auth AH]Ribosomal_L6e7mpiAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
VA [auth AJ]Ribosomal_L5_Ce7mpiAJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
WA [auth AL]Ribosomal_L13ee7mpiAL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
XA [auth AM]Ribosomal_L14ee7mpiAM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
YA [auth AN]Ribosomal_L15ee7mpiAN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
AB [auth AP]Ribosomal_L22e7mpiAP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CB [auth AR]Ribosomal_L19e_Ne7mpiAR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
CB [auth AR]Ribosomal_L19e_Ce7mpiAR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
DB [auth AS]Ribosomal_L18Ae7mpiAS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
FB [auth AU]Ribosomal_L22ee7mpiAU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
GB [auth AV]Ribosomal_L14e7mpiAV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
IB [auth AX]Ribosomal_L23_3e7mpiAX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
JB [auth AY]Ribosomal_L26e7mpiAY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
KB [auth AZ]Ribosomal_L27ee7mpiAZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
MB [auth Ab]Ribosomal_L29ee7mpiAb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
PB [auth Ae]Ribosomal_L32ee7mpiAe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
TB [auth Ai]Ribosomal_L36ee7mpiAi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
UB [auth Aj]Ribosomal_L37ee7mpiAj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
VB [auth Ak]Ribosomal_L38ee7mpiAk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
XB [auth Am]Ribosomal_L40ee7mpiAm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
YB [auth An]Ribosomal_L41e7mpiAn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
AC [auth Ap]Ribosomal_L37aee7mpiAp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
A [auth BA]Ribosomal_S2_2e7mpiBA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
M [auth BM]Ribosomal_L7Aee7mpiBM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
O [auth BO]Ribosomal_S11e7mpiBO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
R [auth BR]Ribosomal_S17ee7mpiBR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
W [auth BW]Ribosomal_S8_N_1e7mpiBW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
W [auth BW]Ribosomal_S8_C_1e7mpiBW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
Z [auth BZ]Ribosomal_S25e7mpiBZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
C [auth BC]Ribosomal_S5_C_1e7mpiBC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
C [auth BC]Ribosomal_S5_3e7mpiBC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
C [auth BC]Ribosomal_S5_2e7mpiBC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
GA [auth Bg]ANAPC4_WD40_2e7mpiBg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
HA [auth Bh]HABP4_PAI-RBP1_Ne7mpiBh1 A: extended segmentsX: Suppressor protein STM1 (From Topology)H: Suppressor protein STM1 (From Topology)T: Suppressor protein STM1F: HABP4_PAI-RBP1_NECOD (1.6)
OA [auth AC]Ribosomal_L4e7mpiAC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
OA [auth AC]Ribos_L4_asso_Ce7mpiAC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
RA [auth AF]Ribosomal_L30_1e7mpiAF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
SA [auth AG]Ribosomal_L7Ae_1e7mpiAG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
UA [auth AI]Ribosomal_L16e7mpiAI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
E [auth BE]Ribosomal_S4ee7mpiBE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
E [auth BE]40S_S4_Ce7mpiBE3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
E [auth BE]RS4NTe7mpiBE2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
ZA [auth AO]Ribosomal_L13e7mpiAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
BB [auth AQ]Ribosomal_L18e7mpiAQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
EB [auth AT]Ribosomal_L21ee7mpiAT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
HB [auth AW]Ribosomal_L24ee7mpiAW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
LB [auth Aa]Ribosomal_L18e7mpiAa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
NB [auth Ac]Ribosomal_L7Aee7mpiAc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
OB [auth Ad]Ribosomal_L31ee7mpiAd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
QB [auth Af]Ribosomal_L35Aee7mpiAf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
RB [auth Ag]Ribosomal_L34ee7mpiAg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
SB [auth Ah]Ribosomal_L29_2e7mpiAh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
WB [auth Al]Ribosomal_L39e7mpiAl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
ZB [auth Ao]Ribosomal_L44e7mpiAo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
I [auth BI]Ribosomal_S8ee7mpiBI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth BB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
D [auth BD]PF07650KH domain (KH_2)KH domain- Domain
D [auth BD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
F [auth BF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
G [auth BG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
H [auth BH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
J [auth BJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
J [auth BJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
K [auth BK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
L [auth BL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
L [auth BL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
N [auth BN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
N [auth BN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
P [auth BP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
Q [auth BQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
S [auth BS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
T [auth BT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
U [auth BU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
V [auth BV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
X [auth BX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
Y [auth BY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
AA [auth Ba]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
BA [auth Bb]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
CA [auth Bc]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
DA [auth Bd]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
EA [auth Be]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
FA [auth Bf]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
MA [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
MA [auth AA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth AB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PA [auth AD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth AD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
QA [auth AE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
TA [auth AH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
VA [auth AJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
VA [auth AJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
WA [auth AL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
XA [auth AM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
XA [auth AM]PF00467KOW motif (KOW)KOW motif- Family
YA [auth AN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
AB [auth AP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CB [auth AR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
DB [auth AS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
FB [auth AU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
GB [auth AV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
IB [auth AX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
IB [auth AX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
JB [auth AY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
JB [auth AY]PF00467KOW motif (KOW)KOW motif- Family
KB [auth AZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
MB [auth Ab]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
PB [auth Ae]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
TB [auth Ai]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
UB [auth Aj]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
VB [auth Ak]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
XB [auth Am]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
YB [auth An]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
AC [auth Ap]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
A [auth BA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
M [auth BM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth BO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
R [auth BR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
W [auth BW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
Z [auth BZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
C [auth BC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
C [auth BC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
GA [auth Bg]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
HA [auth Bh]PF09598Stm1 (Stm1_N)Stm1- Family
OA [auth AC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
OA [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
RA [auth AF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
RA [auth AF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
SA [auth AG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
UA [auth AI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
E [auth BE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
E [auth BE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
E [auth BE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
E [auth BE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
E [auth BE]PF00467KOW motif (KOW)KOW motif- Family
ZA [auth AO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
BB [auth AQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
EB [auth AT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
HB [auth AW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
LB [auth Aa]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
NB [auth Ac]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OB [auth Ad]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
QB [auth Af]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
RB [auth Ag]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
SB [auth Ah]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
WB [auth Al]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
ZB [auth Ao]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
I [auth BI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth BB]40S ribosomal protein S1-A
D [auth BD]40S ribosomal protein S3
F [auth BF]40S ribosomal protein S5
G [auth BG]40S ribosomal protein S6-A
H [auth BH]40S ribosomal protein S7-A
J [auth BJ]40S ribosomal protein S9-A
K [auth BK]40S ribosomal protein S10-A
L [auth BL]40S ribosomal protein S11-A
N [auth BN]40S ribosomal protein S13
P [auth BP]40S ribosomal protein S15
Q [auth BQ]40S ribosomal protein S16-A
S [auth BS]40S ribosomal protein S18-A
T [auth BT]40S ribosomal protein S19-A
U [auth BU]40S ribosomal protein S20
V [auth BV]40S ribosomal protein S21-A
X [auth BX]40S ribosomal protein S23-A
Y [auth BY]40S ribosomal protein S24-A
AA [auth Ba]40S ribosomal protein S26-B
BA [auth Bb]40S ribosomal protein S27-A
CA [auth Bc]40S ribosomal protein S28-A
DA [auth Bd]40S ribosomal protein S29-A
EA [auth Be]40S ribosomal protein S30-A
FA [auth Bf]40S ribosomal protein S31
IA [auth B5]18S rRNA---
JA [auth A1]25S rRNA---
KA [auth A3]5s rRNA---
LA [auth A4]5.8 S rRNA---
MA [auth AA]60S ribosomal protein L2-A
NA [auth AB]60S ribosomal protein L3
PA [auth AD]60S ribosomal protein L5
QA [auth AE]60S ribosomal protein L6-A
TA [auth AH]60S ribosomal protein L9-A
VA [auth AJ]60S ribosomal protein L11-A
WA [auth AL]60S ribosomal protein L13-A
XA [auth AM]60S ribosomal protein L14-A
YA [auth AN]60S ribosomal protein L15-A
AB [auth AP]60S ribosomal protein L17-A
CB [auth AR]60S ribosomal protein L19-A
DB [auth AS]60S ribosomal protein L20-A
FB [auth AU]60S ribosomal protein L22-A
GB [auth AV]60S ribosomal protein L23-A
IB [auth AX]60S ribosomal protein L25
JB [auth AY]60S ribosomal protein L26-A
KB [auth AZ]60S ribosomal protein L27-A
MB [auth Ab]60S ribosomal protein L29
PB [auth Ae]60S ribosomal protein L32
TB [auth Ai]60S ribosomal protein L36-A
UB [auth Aj]60S ribosomal protein L37-A
VB [auth Ak]60S ribosomal protein L38
XB [auth Am]60S ribosomal protein L40-A
YB [auth An]60S ribosomal protein L41-A
AC [auth Ap]60S ribosomal protein L43-A
A [auth BA]40S ribosomal protein S0-A
M [auth BM]40S ribosomal protein S12
O [auth BO]40S ribosomal protein S14-A
R [auth BR]40S ribosomal protein S17-A
W [auth BW]40S ribosomal protein S22-A
Z [auth BZ]40S ribosomal protein S25-A
C [auth BC]40S ribosomal protein S2
GA [auth Bg]Guanine nucleotide-binding protein subunit beta-like protein
HA [auth Bh]Suppressor protein STM1
OA [auth AC]60S ribosomal protein L4-A
RA [auth AF]60S ribosomal protein L7-A
SA [auth AG]60S ribosomal protein L8-A
UA [auth AI]60S ribosomal protein L10
E [auth BE]40S ribosomal protein S4-A
ZA [auth AO]60S ribosomal protein L16-A
BB [auth AQ]60S ribosomal protein L18-A
EB [auth AT]60S ribosomal protein L21-A
HB [auth AW]60S ribosomal protein L24-A
LB [auth Aa]60S ribosomal protein L28
NB [auth Ac]60S ribosomal protein L30
OB [auth Ad]60S ribosomal protein L31-A
QB [auth Af]60S ribosomal protein L33-A
RB [auth Ag]60S ribosomal protein L34-A
SB [auth Ah]60S ribosomal protein L35-A
WB [auth Al]60S ribosomal protein L39
ZB [auth Ao]60S ribosomal protein L42-A
I [auth BI]40S ribosomal protein S8-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth BB]IPR001593Small ribosomal subunit protein eS1Family
B [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
B [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
D [auth BD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
D [auth BD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
D [auth BD]IPR004044K Homology domain, type 2Domain
D [auth BD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
D [auth BD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
D [auth BD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
D [auth BD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
F [auth BF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
F [auth BF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
F [auth BF]IPR000235Small ribosomal subunit protein uS7Family
F [auth BF]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth BF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
G [auth BG]IPR014401Small ribosomal subunit protein eS6-likeFamily
G [auth BG]IPR001377Small ribosomal subunit protein eS6Family
G [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
H [auth BH]IPR000554Small ribosomal subunit protein eS7Family
H [auth BH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
J [auth BJ]IPR002942RNA-binding S4 domainDomain
J [auth BJ]IPR022801Small ribosomal subunit protein uS4Family
J [auth BJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
J [auth BJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
J [auth BJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
J [auth BJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
K [auth BK]IPR037447Small ribosomal subunit protein eS10Family
K [auth BK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
K [auth BK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
K [auth BK]IPR005326Plectin/eS10, N-terminalDomain
L [auth BL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
L [auth BL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
L [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth BL]IPR000266Small ribosomal subunit protein uS17Family
L [auth BL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
N [auth BN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
N [auth BN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
N [auth BN]IPR000589Small ribosomal subunit protein uS15Family
N [auth BN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
P [auth BP]IPR002222Small ribosomal subunit protein uS19Family
P [auth BP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
P [auth BP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
P [auth BP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
Q [auth BQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Q [auth BQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Q [auth BQ]IPR000754Small ribosomal subunit protein uS9Family
Q [auth BQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
S [auth BS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
S [auth BS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
S [auth BS]IPR001892Small ribosomal subunit protein uS13Family
S [auth BS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
T [auth BT]IPR001266Small ribosomal subunit protein eS19Family
T [auth BT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
T [auth BT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
T [auth BT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth BU]IPR001848Small ribosomal subunit protein uS10Family
U [auth BU]IPR027486Small ribosomal subunit protein uS10 domainDomain
U [auth BU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
U [auth BU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
U [auth BU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
V [auth BV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
V [auth BV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
V [auth BV]IPR001931Small ribosomal subunit protein eS21Family
X [auth BX]IPR006032Small ribosomal subunit protein uS12Family
X [auth BX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
X [auth BX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
Y [auth BY]IPR001976Small ribosomal subunit protein eS24Family
Y [auth BY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Y [auth BY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
AA [auth Ba]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
AA [auth Ba]IPR000892Small ribosomal subunit protein eS26Family
AA [auth Ba]IPR047864Ribosomal protein eS26, conserved siteConserved Site
BA [auth Bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
BA [auth Bb]IPR000592Small ribosomal subunit protein eS27Family
BA [auth Bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth Bc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
CA [auth Bc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth Bc]IPR000289Small ribosomal subunit protein eS28Family
DA [auth Bd]IPR001209Small ribosomal subunit protein uS14Family
DA [auth Bd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
DA [auth Bd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
DA [auth Bd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
EA [auth Be]IPR006846Small ribosomal subunit protein eS30Family
FA [auth Bf]IPR019954Ubiquitin conserved siteConserved Site
FA [auth Bf]IPR000626Ubiquitin-like domainDomain
FA [auth Bf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
FA [auth Bf]IPR002906Small ribosomal subunit protein eS31Domain
FA [auth Bf]IPR019956Ubiquitin domainDomain
FA [auth Bf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FA [auth Bf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth AA]IPR002171Large ribosomal subunit protein uL2Family
NA [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth AB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
NA [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
NA [auth AB]IPR000597Large ribosomal subunit protein uL3Family
NA [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
PA [auth AD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
PA [auth AD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
QA [auth AE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
QA [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth AE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
QA [auth AE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth AE]IPR000915Large ribosomal subunit protein eL6Family
TA [auth AH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
TA [auth AH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
TA [auth AH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
TA [auth AH]IPR000702Large ribosomal subunit protein uL6-likeFamily
VA [auth AJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
VA [auth AJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
VA [auth AJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
VA [auth AJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
VA [auth AJ]IPR002132Large ribosomal subunit protein uL5Family
WA [auth AL]IPR001380Large ribosomal subunit protein eL13Family
WA [auth AL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
XA [auth AM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth AM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth AM]IPR039660Large ribosomal subunit protein eL14Family
XA [auth AM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
XA [auth AM]IPR002784Large ribosomal subunit protein eL14 domainDomain
XA [auth AM]IPR005824KOWDomain
YA [auth AN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
YA [auth AN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
YA [auth AN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
YA [auth AN]IPR000439Large ribosomal subunit protein eL15Family
AB [auth AP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
AB [auth AP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
AB [auth AP]IPR001063Large ribosomal subunit protein uL22Family
AB [auth AP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
CB [auth AR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
CB [auth AR]IPR039547Large ribosomal subunit protein eL19Family
CB [auth AR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
CB [auth AR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
CB [auth AR]IPR000196Large ribosomal subunit protein eL19 domainDomain
CB [auth AR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
DB [auth AS]IPR028877Large ribosomal subunit protein eL20Family
DB [auth AS]IPR023573Large ribosomal subunit protein eL20 domainDomain
DB [auth AS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
FB [auth AU]IPR002671Large ribosomal subunit protein eL22Family
FB [auth AU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
GB [auth AV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
GB [auth AV]IPR000218Large ribosomal subunit protein uL14Family
GB [auth AV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IB [auth AX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IB [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
IB [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IB [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IB [auth AX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
JB [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
JB [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
JB [auth AY]IPR005824KOWDomain
JB [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JB [auth AY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
JB [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
KB [auth AZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
KB [auth AZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
KB [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth AZ]IPR001141Large ribosomal subunit protein eL27Family
KB [auth AZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
MB [auth Ab]IPR002673Large ribosomal subunit protein eL29Family
PB [auth Ae]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
PB [auth Ae]IPR001515Large ribosomal subunit protein eL32Family
PB [auth Ae]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
TB [auth Ai]IPR000509Large ribosomal subunit protein eL36Family
TB [auth Ai]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
UB [auth Aj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UB [auth Aj]IPR001569Large ribosomal subunit protein eL37Family
UB [auth Aj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
UB [auth Aj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VB [auth Ak]IPR002675Large ribosomal subunit protein eL38Family
VB [auth Ak]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
XB [auth Am]IPR019954Ubiquitin conserved siteConserved Site
XB [auth Am]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
XB [auth Am]IPR000626Ubiquitin-like domainDomain
XB [auth Am]IPR019956Ubiquitin domainDomain
XB [auth Am]IPR001975Large ribosomal subunit protein eL40 domainDomain
XB [auth Am]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
YB [auth An]IPR007836Large ribosomal subunit protein eS32Family
AC [auth Ap]IPR002674Large ribosomal subunit protein eL43Family
AC [auth Ap]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Ap]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
A [auth BA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
A [auth BA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
A [auth BA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
A [auth BA]IPR001865Small ribosomal subunit protein uS2Family
A [auth BA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
M [auth BM]IPR000530Small ribosomal subunit protein eS12Family
M [auth BM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
M [auth BM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
M [auth BM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
O [auth BO]IPR001971Small ribosomal subunit protein uS11Family
O [auth BO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth BO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
R [auth BR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
R [auth BR]IPR001210Small ribosomal subunit protein eS17Family
R [auth BR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
W [auth BW]IPR000630Small ribosomal subunit protein uS8Family
W [auth BW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
W [auth BW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
Z [auth BZ]IPR004977Small ribosomal subunit protein eS25Family
Z [auth BZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth BC]IPR000851Small ribosomal subunit protein uS5Family
C [auth BC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
C [auth BC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
C [auth BC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
C [auth BC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth BC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
C [auth BC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GA [auth Bg]IPR019775WD40 repeat, conserved siteConserved Site
GA [auth Bg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
GA [auth Bg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
GA [auth Bg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
GA [auth Bg]IPR001680WD40 repeatRepeat
GA [auth Bg]IPR020472G-protein beta WD-40 repeatRepeat
HA [auth Bh]IPR019084STM1-like, N-terminalDomain
HA [auth Bh]IPR006861Hyaluronan/mRNA-binding proteinDomain
OA [auth AC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
OA [auth AC]IPR002136Large ribosomal subunit protein uL4Family
OA [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
OA [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
OA [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
RA [auth AF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
RA [auth AF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
RA [auth AF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
RA [auth AF]IPR039699Large ribosomal subunit protein uL30Family
RA [auth AF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
RA [auth AF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
RA [auth AF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
SA [auth AG]IPR001921Large ribosomal subunit protein eL8Family
SA [auth AG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
SA [auth AG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
SA [auth AG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
SA [auth AG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
UA [auth AI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
UA [auth AI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
UA [auth AI]IPR016180Large ribosomal subunit protein uL16 domainDomain
UA [auth AI]IPR047873Large ribosomal subunit protein uL16Family
UA [auth AI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
E [auth BE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
E [auth BE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
E [auth BE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
E [auth BE]IPR002942RNA-binding S4 domainDomain
E [auth BE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
E [auth BE]IPR000876Small ribosomal subunit protein eS4Family
E [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth BE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
E [auth BE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
E [auth BE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth BE]IPR005824KOWDomain
ZA [auth AO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
ZA [auth AO]IPR005822Large ribosomal subunit protein uL13Family
ZA [auth AO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
ZA [auth AO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
BB [auth AQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
BB [auth AQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
BB [auth AQ]IPR000039Large ribosomal subunit protein eL18Family
BB [auth AQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
EB [auth AT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
EB [auth AT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
EB [auth AT]IPR001147Large ribosomal subunit protein eL21Family
EB [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HB [auth AW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
HB [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
HB [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
LB [auth Aa]IPR021131Large ribosomal subunit protein uL15/eL18Domain
LB [auth Aa]IPR030878Large ribosomal subunit protein uL15Family
LB [auth Aa]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
LB [auth Aa]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
NB [auth Ac]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
NB [auth Ac]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
NB [auth Ac]IPR039109Large ribosomal subunit protein eL30-likeFamily
NB [auth Ac]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
OB [auth Ad]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
OB [auth Ad]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OB [auth Ad]IPR000054Large ribosomal subunit protein eL31Family
QB [auth Af]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
QB [auth Af]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QB [auth Af]IPR001780Large ribosomal subunit protein eL33Family
QB [auth Af]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
RB [auth Ag]IPR008195Large ribosomal subunit protein eL34Family
RB [auth Ag]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
SB [auth Ah]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
SB [auth Ah]IPR001854Large ribosomal subunit protein uL29Family
SB [auth Ah]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
SB [auth Ah]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
WB [auth Al]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
WB [auth Al]IPR000077Large ribosomal subunit protein eL39Family
WB [auth Al]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
ZB [auth Ao]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Ao]IPR000552Large ribosomal subunit protein eL42Family
I [auth BI]IPR001047Small ribosomal subunit protein eS8Family
I [auth BI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
I [auth BI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
I [auth BI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
IA [auth B5]3AU Parent Component: U

IA [auth B5]4AC
IA [auth B5]A2M Parent Component: A

IA [auth B5]G7M Parent Component: G

IA [auth B5]MA6 Parent Component: A

IA [auth B5]OMC Parent Component: C

IA [auth B5]OMG Parent Component: G

IA [auth B5]OMU Parent Component: U

JA [auth A1]1MA Parent Component: A

JA [auth A1]5MC Parent Component: C

JA [auth A1]A2M Parent Component: A

JA [auth A1]OMC Parent Component: C

JA [auth A1]OMG Parent Component: G

JA [auth A1]OMU Parent Component: U

JA [auth A1]UR3 Parent Component: U

NA [auth AB]HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322