7MDZ | pdb_00007mdz

80S rabbit ribosome stalled with benzamide-CHX


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
UB [auth ee]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
TB [auth dd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
SB [auth cc]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
QB [auth aa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053150 3000068 SCOP2B (2022-06-29)
PB [auth ZZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
MB [auth WW]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
LB [auth VV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053140 3000068 SCOP2B (2022-06-29)
KB [auth UU]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
JB [auth TT]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
IB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
GB [auth QQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
EB [auth OO]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
DB [auth NN]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
DB [auth NN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
CB [auth MM]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
BB [auth LL]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
BB [auth LL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
YA [auth II]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
VA [auth FF]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
UA [auth EE]SCOP2B SuperfamilyNucleic acid-binding proteins 8052746 3000135 SCOP2B (2022-06-29)
UA [auth EE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052747 3000334 SCOP2B (2022-06-29)
UA [auth EE]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052745 3001473 SCOP2B (2022-06-29)
RA [auth BB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
QA [auth AA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8097826 3001397 SCOP2B (2022-06-29)
OA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
KA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095595 3001756 SCOP2B (2022-06-29)
JA [auth k]SCOP2B SuperfamilyRibosomal L38e protein-like 8093716 3002206 SCOP2B (2022-06-29)
HA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
FA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
CSCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
BA [auth c]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
Z [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
T [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8061156 3002158 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8107568 3000890 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IRibosomal_L16e7mdzI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
HRibosomal_L6_2e7mdzH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
HRibosomal_L6e7mdzH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
WB [auth gg]DUF1899e7mdzgg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: DUF1899ECOD (1.6)
VB [auth ff]Ribosomal_S27e7mdzff1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
UB [auth ee]Ribosomal_S30e7mdzee1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
TB [auth dd]Ribosomal_S14_2e7mdzdd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
SB [auth cc]Ribosomal_S28ee7mdzcc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
RB [auth bb]Ribosomal_S27ee7mdzbb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
GRibosomal_L7Ae_1e7mdzG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
QB [auth aa]Ribosomal_S26ee7mdzaa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
PB [auth ZZ]Ribosomal_S25e7mdzZZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
OB [auth YY]Ribosomal_S24ee7mdzYY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
NB [auth XX]Ribosom_S12_S23e7mdzXX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MB [auth WW]Ribosomal_S8_N_1e7mdzWW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
MB [auth WW]Ribosomal_S8_C_1e7mdzWW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
LB [auth VV]Ribosomal_S21ee7mdzVV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
KB [auth UU]Ribosomal_S10_1e7mdzUU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
JB [auth TT]Ribosomal_S19ee7mdzTT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
IB [auth SS]Ribosomal_S13e7mdzSS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
HB [auth RR]Ribosomal_S17ee7mdzRR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
FRibosomal_L30_1e7mdzF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
GB [auth QQ]Ribosomal_S9e7mdzQQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
FB [auth PP]Ribosomal_S19e7mdzPP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
EB [auth OO]Ribosomal_S11e7mdzOO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
DB [auth NN]Ribosomal_S13_Ne7mdzNN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
DB [auth NN]Ribosomal_S15_2e7mdzNN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
CB [auth MM]Ribosomal_L7Aee7mdzMM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
BB [auth LL]Ribosomal_S17_1e7mdzLL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
AB [auth KK]S10_plectine7mdzKK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
ZA [auth JJ]S4e7mdzJJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
YA [auth II]Ribosomal_S8ee7mdzII1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
XA [auth HH]Ribosomal_S7e_Ne7mdzHH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
XA [auth HH]Ribosomal_S7e_C_1e7mdzHH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
ERibosomal_L6ee7mdzE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
WA [auth GG]Ribosomal_S6ee7mdzGG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
VA [auth FF]Ribosomal_S7_1e7mdzFF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
UA [auth EE]Ribosomal_S4ee7mdzEE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
UA [auth EE]40S_S4_Ce7mdzEE3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
UA [auth EE]RS4NTe7mdzEE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
TA [auth DD]Ribosomal_S3_Ce7mdzDD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
TA [auth DD]KH_2_3e7mdzDD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
SA [auth CC]Ribosomal_S5_C_1e7mdzCC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
SA [auth CC]Ribosomal_S5_3e7mdzCC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
SA [auth CC]Ribosomal_S5_2e7mdzCC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
RA [auth BB]Ribosomal_S3Ae_Ne7mdzBB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
RA [auth BB]Ribosomal_S3Ae_Ce7mdzBB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
QA [auth AA]Ribosomal_S2_2e7mdzAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
PA [auth r]Ribosomal_L28ee7mdzr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
OA [auth p]Ribosomal_L37aee7mdzp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
NA [auth o]Ribosomal_L44e7mdzo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
DRibosomal_L5ee7mdzD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
MA [auth n]Ribosomal_L41e7mdzn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
LA [auth m]Ribosomal_L40ee7mdzm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
KA [auth l]Ribosomal_L39e7mdzl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
JA [auth k]Ribosomal_L38ee7mdzk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
IA [auth j]Ribosomal_L37ee7mdzj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
HA [auth i]Ribosomal_L36ee7mdzi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
GA [auth h]Ribosomal_L29_2e7mdzh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
FA [auth g]Ribosomal_L34ee7mdzg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
EA [auth f]Ribosomal_L35Aee7mdzf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
DA [auth e]Ribosomal_L32ee7mdze1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
CRibosomal_L4e7mdzC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
CRibos_L4_asso_Ce7mdzC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
CA [auth d]Ribosomal_L31ee7mdzd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
BA [auth c]Ribosomal_L7Aee7mdzc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
AA [auth b]Ribosomal_L29ee7mdzb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
Z [auth a]Ribosomal_L18e7mdza1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Y [auth Z]Ribosomal_L27ee7mdzZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
X [auth Y]Ribosomal_L26e7mdzY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
W [auth X]Ribosomal_L23_3e7mdzX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
V [auth W]Ribosomal_L24ee7mdzW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
U [auth V]Ribosomal_L14e7mdzV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
T [auth U]Ribosomal_L22ee7mdzU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
BRibosomal_L3e7mdzB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
S [auth T]Ribosomal_L21ee7mdzT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
R [auth S]Ribosomal_L18Ae7mdzS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
Q [auth R]Ribosomal_L19e_Ne7mdzR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Q [auth R]Ribosomal_L19e_Ce7mdzR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
P [auth Q]Ribosomal_L18e7mdzQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
O [auth P]Ribosomal_L22e7mdzP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
N [auth O]Ribosomal_L13e7mdzO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
M [auth N]Ribosomal_L15ee7mdzN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
L [auth M]Ribosomal_L14ee7mdzM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
K [auth L]Ribosomal_L13ee7mdzL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
JRibosomal_L5_Ce7mdzJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
ARibosomal_L2_1e7mdzA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ARibosomal_L2_C_2e7mdzA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OB [auth YY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
NB [auth XX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
MB [auth WW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
LB [auth VV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
KB [auth UU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
JB [auth TT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
IB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
GB [auth QQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
FB [auth PP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
EB [auth OO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
DB [auth NN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
DB [auth NN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
CB [auth MM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
BB [auth LL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
BB [auth LL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
AB [auth KK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
ZA [auth JJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
ZA [auth JJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
YA [auth II]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
WA [auth GG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
WA [auth GG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
VA [auth FF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
VA [auth FF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
UA [auth EE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
UA [auth EE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
UA [auth EE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
UA [auth EE]PF00467KOW motif (KOW)KOW motif- Family
TA [auth DD]PF07650KH domain (KH_2)KH domainDomain
TA [auth DD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
TA [auth DD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
SA [auth CC]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
RA [auth BB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
QA [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
QA [auth AA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00467KOW motif (KOW)KOW motif- Family
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
R [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
Q [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
Q [auth R]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
P [auth Q]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
O [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
M [auth N]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
60S ribosomal protein L10
CC [auth 6]mRNA---
BC [auth 9]18S rRNA---
60S ribosomal protein L9
AC [auth 2]P-site tRNA---
ZB [auth 8]5.8S rRNA---
YB [auth 7]5S rRNA---
XB [auth 5]28S rRNA---
WB [auth gg]RACK1
VB [auth ff]eS31
UB [auth ee]eS30
TB [auth dd]eS29
SB [auth cc]eS28
RB [auth bb]eS27
60S ribosomal protein L7a -
QB [auth aa]40S ribosomal protein S26
PB [auth ZZ]eS25
OB [auth YY]40S ribosomal protein S24
NB [auth XX]uS12
MB [auth WW]uS8
LB [auth VV]40S ribosomal protein S21
KB [auth UU]uS10
JB [auth TT]eS19
IB [auth SS]uS13
HB [auth RR]eS17
60S ribosomal protein L7
GB [auth QQ]uS9
FB [auth PP]uS19
EB [auth OO]uS11
DB [auth NN]uS15
CB [auth MM]eS12
BB [auth LL]uS17
AB [auth KK]S10_plectin domain-containing protein -
ZA [auth JJ]uS4
YA [auth II]eS8
XA [auth HH]eS7
60S ribosomal protein L6
WA [auth GG]eS6
VA [auth FF]uS7
UA [auth EE]40S ribosomal protein S4
TA [auth DD]Ribosomal protein S3
SA [auth CC]uS5---
RA [auth BB]eS1
QA [auth AA]40S ribosomal protein SA
PA [auth r]eL28
OA [auth p]eL43
NA [auth o]eL42
Ribosomal_L18_c domain-containing protein
MA [auth n]60s ribosomal protein l41
LA [auth m]eL40---
KA [auth l]eL39
JA [auth k]60S ribosomal protein L38
IA [auth j]Ribosomal protein L37
HA [auth i]60S ribosomal protein L36
GA [auth h]eL35
FA [auth g]60S ribosomal protein L34
EA [auth f]eL33
DA [auth e]eL32
60S ribosomal protein L4
CA [auth d]eL31
BA [auth c]eL30
AA [auth b]60S ribosomal protein L29
Z [auth a]60S ribosomal protein L27a
Y [auth Z]60S ribosomal protein L27
X [auth Y]uL24
W [auth X]eL23
V [auth W]60S ribosomal protein L24
U [auth V]Ribosomal protein L23
T [auth U]eL22
uL3
S [auth T]eL21
R [auth S]60S ribosomal protein L18a
Q [auth R]Ribosomal protein L19
P [auth Q]Ribosomal protein L18
O [auth P]uL22
N [auth O]uL13---
M [auth N]Ribosomal protein L15
L [auth M]60S ribosomal protein L14
K [auth L]60S ribosomal protein L13- - -
60S ribosomal protein L11
Ribosomal protein L8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
WB [auth gg]IPR019775WD40 repeat, conserved siteConserved Site
WB [auth gg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
WB [auth gg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
WB [auth gg]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
WB [auth gg]IPR001680WD40 repeatRepeat
WB [auth gg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
VB [auth ff]IPR019954Ubiquitin conserved siteConserved Site
VB [auth ff]IPR000626Ubiquitin-like domainDomain
VB [auth ff]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
VB [auth ff]IPR002906Small ribosomal subunit protein eS31Domain
VB [auth ff]IPR019956Ubiquitin domainDomain
VB [auth ff]IPR050158Ubiquitin and ubiquitin-likeFamily
VB [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
VB [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB [auth ee]IPR039415Ubiquitin-like protein FUBIDomain
UB [auth ee]IPR019956Ubiquitin domainDomain
UB [auth ee]IPR019954Ubiquitin conserved siteConserved Site
UB [auth ee]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UB [auth ee]IPR000626Ubiquitin-like domainDomain
UB [auth ee]IPR006846Small ribosomal subunit protein eS30Family
TB [auth dd]IPR001209Small ribosomal subunit protein uS14Family
TB [auth dd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
TB [auth dd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
TB [auth dd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
SB [auth cc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
SB [auth cc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SB [auth cc]IPR000289Small ribosomal subunit protein eS28Family
RB [auth bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
RB [auth bb]IPR000592Small ribosomal subunit protein eS27Family
RB [auth bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
QB [auth aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
QB [auth aa]IPR000892Small ribosomal subunit protein eS26Family
QB [auth aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
PB [auth ZZ]IPR004977Small ribosomal subunit protein eS25Family
PB [auth ZZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
OB [auth YY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
OB [auth YY]IPR001976Small ribosomal subunit protein eS24Family
OB [auth YY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OB [auth YY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
NB [auth XX]IPR006032Small ribosomal subunit protein uS12Family
NB [auth XX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NB [auth XX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
MB [auth WW]IPR000630Small ribosomal subunit protein uS8Family
MB [auth WW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
MB [auth WW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
LB [auth VV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
LB [auth VV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
LB [auth VV]IPR001931Small ribosomal subunit protein eS21Family
KB [auth UU]IPR001848Small ribosomal subunit protein uS10Family
KB [auth UU]IPR027486Small ribosomal subunit protein uS10 domainDomain
KB [auth UU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
KB [auth UU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
KB [auth UU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
JB [auth TT]IPR001266Small ribosomal subunit protein eS19Family
JB [auth TT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
JB [auth TT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
JB [auth TT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
IB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
HB [auth RR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
HB [auth RR]IPR001210Small ribosomal subunit protein eS17Family
HB [auth RR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
IPR039699Large ribosomal subunit protein uL30Family
IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
GB [auth QQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
GB [auth QQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
GB [auth QQ]IPR000754Small ribosomal subunit protein uS9Family
GB [auth QQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FB [auth PP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
FB [auth PP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
FB [auth PP]IPR002222Small ribosomal subunit protein uS19Family
FB [auth PP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
EB [auth OO]IPR001971Small ribosomal subunit protein uS11Family
EB [auth OO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
EB [auth OO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
DB [auth NN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
DB [auth NN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
DB [auth NN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
DB [auth NN]IPR000589Small ribosomal subunit protein uS15Family
CB [auth MM]IPR000530Small ribosomal subunit protein eS12Family
CB [auth MM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
CB [auth MM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
CB [auth MM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BB [auth LL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
BB [auth LL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BB [auth LL]IPR000266Small ribosomal subunit protein uS17Family
BB [auth LL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
BB [auth LL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
AB [auth KK]IPR037447Small ribosomal subunit protein eS10Family
AB [auth KK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
AB [auth KK]IPR005326Plectin/eS10, N-terminalDomain
ZA [auth JJ]IPR002942RNA-binding S4 domainDomain
ZA [auth JJ]IPR022801Small ribosomal subunit protein uS4Family
ZA [auth JJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
ZA [auth JJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
ZA [auth JJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
ZA [auth JJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
YA [auth II]IPR001047Small ribosomal subunit protein eS8Family
YA [auth II]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
YA [auth II]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
YA [auth II]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
XA [auth HH]IPR000554Small ribosomal subunit protein eS7Family
XA [auth HH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
WA [auth GG]IPR014401Small ribosomal subunit protein eS6-likeFamily
WA [auth GG]IPR001377Small ribosomal subunit protein eS6Family
WA [auth GG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
VA [auth FF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
VA [auth FF]IPR000235Small ribosomal subunit protein uS7Family
VA [auth FF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
VA [auth FF]IPR023798Small ribosomal subunit protein uS7 domainDomain
VA [auth FF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
UA [auth EE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
UA [auth EE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
UA [auth EE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
UA [auth EE]IPR002942RNA-binding S4 domainDomain
UA [auth EE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
UA [auth EE]IPR000876Small ribosomal subunit protein eS4Family
UA [auth EE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UA [auth EE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
UA [auth EE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
UA [auth EE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
UA [auth EE]IPR005824KOWDomain
TA [auth DD]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
TA [auth DD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
TA [auth DD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
TA [auth DD]IPR004044K Homology domain, type 2Domain
TA [auth DD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
TA [auth DD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
TA [auth DD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
RA [auth BB]IPR001593Small ribosomal subunit protein eS1Family
RA [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
RA [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
QA [auth AA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
QA [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
QA [auth AA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
QA [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
QA [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
QA [auth AA]IPR001865Small ribosomal subunit protein uS2Family
QA [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
PA [auth r]IPR029004Ribosomal eL28/Mak16Domain
PA [auth r]IPR002672Large ribosomal subunit protein eL28Family
OA [auth p]IPR002674Large ribosomal subunit protein eL43Family
OA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
NA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth o]IPR000552Large ribosomal subunit protein eL42Family
IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
MA [auth n]IPR007836Large ribosomal subunit protein eS32Family
KA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth l]IPR000077Large ribosomal subunit protein eL39Family
KA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
JA [auth k]IPR002675Large ribosomal subunit protein eL38Family
JA [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
IA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth j]IPR001569Large ribosomal subunit protein eL37Family
IA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
IA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth i]IPR000509Large ribosomal subunit protein eL36Family
HA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
GA [auth h]IPR001854Large ribosomal subunit protein uL29Family
GA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
GA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
GA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
FA [auth g]IPR008195Large ribosomal subunit protein eL34Family
FA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
FA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
EA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth f]IPR001780Large ribosomal subunit protein eL33Family
EA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth e]IPR001515Large ribosomal subunit protein eL32Family
DA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
IPR002136Large ribosomal subunit protein uL4Family
IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
CA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth d]IPR000054Large ribosomal subunit protein eL31Family
BA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BA [auth c]IPR000231Large ribosomal subunit protein eL30Family
BA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
BA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AA [auth b]IPR002673Large ribosomal subunit protein eL29Family
Z [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
Z [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Z [auth a]IPR030878Large ribosomal subunit protein uL15Family
Z [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Z [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR005824KOWDomain
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth X]IPR019985Large ribosomal subunit protein uL23Family
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth W]IPR011017TRASH domainDomain
V [auth W]IPR056366Large ribosomal subunit protein eL24Family
V [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
V [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
V [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
T [auth U]IPR002671Large ribosomal subunit protein eL22Family
T [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth S]IPR028877Large ribosomal subunit protein eL20Family
R [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
R [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
Q [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth R]IPR039547Large ribosomal subunit protein eL19Family
Q [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Q [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
Q [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
P [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth Q]IPR000039Large ribosomal subunit protein eL18Family
P [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
O [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
O [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth P]IPR001063Large ribosomal subunit protein uL22Family
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family