7M2T | pdb_00007m2t

Crystallographic Structure of the Monoclinic Form of Satellite Tobacco Mosaic Virus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
WB [auth PP]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
VB [auth OO]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
UB [auth NN]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
TB [auth MM]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
SB [auth LL]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
RB [auth KK]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
QB [auth JJ]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
PB [auth II]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
OB [auth HH]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
NB [auth GG]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
MB [auth FF]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
LB [auth EE]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
KB [auth DD]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
JB [auth CC]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
IB [auth BB]	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Satellite viruses	8040781	3000942	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
WB [auth PP]	ubiquitin	e7m2tPP1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
VB [auth OO]	ubiquitin	e7m2tOO1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
UB [auth NN]	ubiquitin	e7m2tNN1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
TB [auth MM]	ubiquitin	e7m2tMM1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
SB [auth LL]	ubiquitin	e7m2tLL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
RB [auth KK]	ubiquitin	e7m2tKK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
QB [auth JJ]	ubiquitin	e7m2tJJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
PB [auth II]	ubiquitin	e7m2tII1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
OB [auth HH]	ubiquitin	e7m2tHH1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
O	ubiquitin	e7m2tO1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
NB [auth GG]	ubiquitin	e7m2tGG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
N	ubiquitin	e7m2tN1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
MB [auth FF]	ubiquitin	e7m2tFF1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
M	ubiquitin	e7m2tM1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
LB [auth EE]	ubiquitin	e7m2tEE1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
L	ubiquitin	e7m2tL1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
KB [auth DD]	ubiquitin	e7m2tDD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
K	ubiquitin	e7m2tK1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
JB [auth CC]	ubiquitin	e7m2tCC1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
J	ubiquitin	e7m2tJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
IB [auth BB]	ubiquitin	e7m2tBB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
I	ubiquitin	e7m2tI1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
H	ubiquitin	e7m2tH1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
G	ubiquitin	e7m2tG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
F	ubiquitin	e7m2tF1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
E	ubiquitin	e7m2tE1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
D	ubiquitin	e7m2tD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
C	ubiquitin	e7m2tC1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
B	ubiquitin	e7m2tB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)
A	ubiquitin	e7m2tA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ubiquitin	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AB [auth 1], AD [auth vv], BB [auth 2], BD [auth ww], CB [auth 3], AB [auth 1], AD [auth vv], BB [auth 2], BD [auth ww], CB [auth 3], CD [auth xx], DB [auth 4], DD [auth yy], EA [auth e], EB [auth 5], ED [auth zz], FA [auth f], FB [auth 6], GA [auth g], GB [auth 7], HA [auth h], HB [auth 8], IA [auth i], JA [auth j], KA [auth k], LA [auth l], MA [auth m], MC [auth hh], NA [auth n], NC [auth ii], OA [auth o], OC [auth jj], PA [auth p], PC [auth kk], QA [auth q], QC [auth ll], RA [auth r], RC [auth mm], SA [auth s], SC [auth nn], TA [auth t], TC [auth oo], UA [auth u], UC [auth pp], VA [auth v], VC [auth qq], WA [auth w], WC [auth rr], XA [auth x], XC [auth ss], YA [auth y], YC [auth tt], ZA [auth z], ZC [auth uu]	RNA (27-mer)	-	-	-
AA [auth a], AC [auth TT], BA [auth b], BC [auth UU], CA [auth c], AA [auth a], AC [auth TT], BA [auth b], BC [auth UU], CA [auth c], CC [auth VV], DA [auth d], DC [auth WW], EC [auth YY], FC [auth ZZ], GC [auth bb], HC [auth cc], IC [auth dd], JC [auth ee], KC [auth ff], LC [auth gg], P, Q, R, S, T, U, V, W, X, XB [auth QQ], Y, YB [auth RR], Z, ZB [auth SS]	RNA (5'-R(PAPAPAPAPAPAPAPAPAPAPAPA)-3')	-	-	-
A, B, C, D, E, A, B, C, D, E, F, G, H, I, IB [auth BB], J, JB [auth CC], K, KB [auth DD], L, LB [auth EE], M, MB [auth FF], N, NB [auth GG], O, OB [auth HH], PB [auth II], QB [auth JJ], RB [auth KK], SB [auth LL], TB [auth MM], UB [auth NN], VB [auth OO], WB [auth PP]	Coat protein	structural molecule activity	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F, G, H, I, IB [auth BB], J, JB [auth CC], K, KB [auth DD], L, LB [auth EE], M, MB [auth FF], N, NB [auth GG], O, OB [auth HH], PB [auth II], QB [auth JJ], RB [auth KK], SB [auth LL], TB [auth MM], UB [auth NN], VB [auth OO], WB [auth PP]	IPR037164	Satellite virus coat domain superfamily	Homologous Superfamily