Annotations: 7M0R

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Sema domain-like	8038490	3000180	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Sema domain-like	8038490	3000180	SCOP2B (2022-06-29)
C [auth F]	SCOP2B Superfamily	Spermadhesin, CUB domain	8079765	3001412	SCOP2B (2022-06-29)
A [auth E]	SCOP2B Superfamily	Spermadhesin, CUB domain	8079765	3001412	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth B]	TIG	e7m0rB4	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG	ECOD (1.6)
F [auth B]	TIG_6	e7m0rB8	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG_6	ECOD (1.6)
F [auth B]	EUF07736	e7m0rB7	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07736	ECOD (1.6)
F [auth B]	TIG_3	e7m0rB6	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG_3	ECOD (1.6)
F [auth B]	Sema_2	e7m0rB3	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_2	ECOD (1.6)
F [auth B]	PSI_2	e7m0rB1	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_2	ECOD (1.6)
F [auth B]	PSI_3	e7m0rB5	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_3	ECOD (1.6)
F [auth B]	PHD_BAZ1A_like_like,PSI	e7m0rB2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PHD_BAZ1A_like_like,PSI	ECOD (1.6)
E [auth A]	TIG	e7m0rA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG	ECOD (1.6)
E [auth A]	TIG_6	e7m0rA3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG_6	ECOD (1.6)
E [auth A]	EUF07736	e7m0rA5	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07736	ECOD (1.6)
E [auth A]	TIG_3	e7m0rA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: TIG_3	ECOD (1.6)
E [auth A]	Sema_2	e7m0rA7	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_2	ECOD (1.6)
E [auth A]	PSI_2	e7m0rA6	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_2	ECOD (1.6)
E [auth A]	PSI_3	e7m0rA8	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_3	ECOD (1.6)
E [auth A]	PHD_BAZ1A_like_like,PSI	e7m0rA4	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PHD_BAZ1A_like_like,PSI	ECOD (1.6)
D	F_UNCLASSIFIED	e7m0rD3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: F_UNCLASSIFIED	ECOD (1.6)
D	Sema_1	e7m0rD1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_1	ECOD (1.6)
D	PSI_1	e7m0rD2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_1	ECOD (1.6)
B [auth C]	F_UNCLASSIFIED	e7m0rC3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: F_UNCLASSIFIED	ECOD (1.6)
B [auth C]	Sema_1	e7m0rC1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Sema_1	ECOD (1.6)
B [auth C]	PSI_1	e7m0rC2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_1	ECOD (1.6)
C [auth F]	F5_F8_type_C	e7m0rF1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: F5_F8_type_C	ECOD (1.6)
C [auth F]	CUB	e7m0rF3	A: beta sandwiches	X: jelly-roll	H: Spermadhesin, CUB domain (From Topology)	T: Spermadhesin, CUB domain	F: CUB	ECOD (1.6)
A [auth E]	F5_F8_type_C	e7m0rE3	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: F5_F8_type_C	ECOD (1.6)
A [auth E]	CUB	e7m0rE4	A: beta sandwiches	X: jelly-roll	H: Spermadhesin, CUB domain (From Topology)	T: Spermadhesin, CUB domain	F: CUB	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F [auth B]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)
E [auth A]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)
C [auth F]	2.60.120.290	Mainly Beta	Sandwich	Jelly Rolls	Spermadhesin, CUB domain	CATH (utative)
C [auth F]	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (utative)
A [auth E]	2.60.120.290	Mainly Beta	Sandwich	Jelly Rolls	Spermadhesin, CUB domain	CATH (utative)
A [auth E]	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E [auth A], F [auth B]	PF01437	Plexin repeat (PSI)	Plexin repeat	-	Family
E [auth A], F [auth B]	PF01833	IPT/TIG domain (TIG)	IPT/TIG domain	This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family d ...	This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognise a significant number of members.	Domain
E [auth A], F [auth B]	PF01403	Sema domain (Sema)	Sema domain	-	Repeat
E [auth A], F [auth B]	PF18020	TIG domain found in plexin (TIG_2)	TIG domain found in plexin	This entry represents a TIG domain found in plexin proteins. TIG domains have an Ig-like fold.	Domain
E [auth A], F [auth B]	PF17960	TIG domain (TIG_plexin)	TIG domain	This entry represents an TIG or IPT domain (Ig domain shared by Plexins and Transcription factors) found in plexins [1].	Domain
B [auth C], D	PF01403	Sema domain (Sema)	Sema domain	-	Repeat
A [auth E], C [auth F]	PF00754	F5/8 type C domain (F5_F8_type_C)	F5/8 type C domain	This domain is also known as the discoidin (DS) domain family [1].	Domain
A [auth E], C [auth F]	PF00431	CUB domain (CUB)	CUB domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth A], F [auth B]	Plexin-A4	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity semaphorin receptor activity	chemotaxis negative chemotaxis regulation of biological process response to stimulus regulation of response to external stimulus biological regulation response to external stimulus regulation of negative chemotaxis regulation of chemotaxis taxis regulation of response to stimulus response to chemical regulation of locomotion locomotion chemotaxis negative chemotaxis regulation of biological process response to stimulus regulation of response to external stimulus biological regulation response to external stimulus regulation of negative chemotaxis regulation of chemotaxis taxis regulation of response to stimulus response to chemical regulation of locomotion locomotion developmental process multicellular organismal process cranial nerve morphogenesis parasympathetic nervous system development nervous system development anatomical structure morphogenesis multicellular organism development cranial nerve structural organization nerve development cranial nerve development central nervous system development preganglionic parasympathetic fiber development anatomical structure development anatomical structure arrangement facial nerve morphogenesis autonomic nervous system development facial nerve structural organization system development facial nerve development axonogenesis cellular developmental process cell projection organization motor neuron axon guidance plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation cellular component organization or biogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons neuron projection guidance neuron development cellular process heart development epithelium development tube development animal organ development embryo development tissue development embryonic heart tube development circulatory system development embryonic organ development sympathetic nervous system development sympathetic neuron axon guidance maintenance of synapse structure cell junction maintenance cell junction organization cellular component maintenance synapse organization branchiomotor neuron axon guidance peripheral nervous system development postganglionic parasympathetic fiber development trigeminal nerve development trigeminal nerve structural organization trigeminal nerve morphogenesis vagus nerve development vagus nerve morphogenesis axon extension regulation of growth regulation of cellular process regulation of cellular component size developmental growth regulation of biological quality neuron projection extension involved in neuron projection guidance developmental growth involved in morphogenesis regulation of cellular component organization regulation of developmental process cell growth regulation of axon extension regulation of axon extension involved in axon guidance regulation of extent of cell growth axon extension involved in axon guidance regulation of cell size neuron projection extension regulation of developmental growth developmental cell growth growth regulation of cell growth regulation of anatomical structure size forebrain development central nervous system neuron development central nervous system neuron differentiation head development central nervous system projection neuron axonogenesis central nervous system neuron axonogenesis brain development anterior commissure morphogenesis telencephalon development cellular response to stimulus cell surface receptor signaling pathway semaphorin-plexin signaling pathway signaling cell communication signal transduction chemorepulsion of branchiomotor axon chemorepulsion of axon cellular response to chemical stimulus glossopharyngeal nerve morphogenesis glossopharyngeal nerve development	cell periphery cellular anatomical structure plasma membrane membrane cerebellar climbing fiber to Purkinje cell synapse neuron to neuron synapse synapse cell junction asymmetric synapse glutamatergic synapse excitatory synapse asymmetric, glutamatergic, excitatory synapse
B [auth C], D	Semaphorin-3A	protein binding binding semaphorin receptor binding signaling receptor binding neuropilin binding molecular function activator activity molecular function regulator activity signaling receptor regulator activity chemorepellent activity receptor ligand activity signaling receptor activator activity	heart process multicellular organismal process system process regulation of biological process regulation of heart contraction regulation of system process biological regulation circulatory system process regulation of blood circulation regulation of multicellular organismal process regulation of biological quality heart contraction blood circulation regulation of heart rate heart process multicellular organismal process system process regulation of biological process regulation of heart contraction regulation of system process biological regulation circulatory system process regulation of blood circulation regulation of multicellular organismal process regulation of biological quality heart contraction blood circulation regulation of heart rate developmental process cranial ganglion development nervous system development tissue development ganglion development multicellular organism development nerve development cranial nerve development facioacoustic ganglion development anatomical structure development system development axon extension regulation of growth regulation of cellular process axonogenesis regulation of cellular component size developmental growth cell projection organization negative regulation of biological process regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell development cell projection morphogenesis neuron differentiation negative regulation of growth neuron projection morphogenesis cell differentiation negative regulation of cellular component organization regulation of cell projection organization negative regulation of cell growth developmental growth involved in morphogenesis generation of neurons negative regulation of axonogenesis negative regulation of developmental growth negative regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization cellular developmental process regulation of developmental process plasma membrane bounded cell projection morphogenesis cell development cell growth cell morphogenesis regulation of axon extension cellular component organization regulation of nervous system development neurogenesis negative regulation of neurogenesis regulation of extent of cell growth regulation of axonogenesis negative regulation of cellular process negative regulation of nervous system development negative regulation of cell differentiation cellular component organization or biogenesis negative regulation of cell projection organization regulation of anatomical structure morphogenesis regulation of cell size neuron projection extension regulation of multicellular organismal development regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth negative regulation of developmental process growth negative regulation of axon extension axon development regulation of cell growth cell morphogenesis involved in neuron differentiation negative regulation of neuron projection development anatomical structure morphogenesis negative regulation of cell development neuron development cellular process regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size negative regulation of locomotion response to stimulus negative regulation of chemotaxis chemotaxis response to external stimulus regulation of response to stimulus regulation of response to external stimulus regulation of axon extension involved in axon guidance locomotion regulation of chemotaxis neuron projection guidance taxis neuron projection extension involved in neuron projection guidance negative regulation of axon extension involved in axon guidance response to chemical regulation of locomotion negative regulation of response to external stimulus axon extension involved in axon guidance negative regulation of response to stimulus axon guidance regulation of gonad development regulation of reproductive process reproductive process sex differentiation positive regulation of biological process developmental process involved in reproduction male gonad development positive regulation of developmental process male sex differentiation development of primary male sexual characteristics development of primary sexual characteristics positive regulation of male gonad development reproductive structure development regulation of male gonad development positive regulation of reproductive process gonad development reproductive system development animal organ development positive regulation of gonad development positive regulation of multicellular organismal process sympathetic neuron projection guidance blastoderm segmentation segmentation neural crest cell development pattern specification process mesenchyme development embryo development mesenchymal cell migration ameboidal-type cell migration cell migration cell motility neural crest cell migration stem cell development neural crest cell differentiation ventral trunk neural crest cell migration embryonic pattern specification regionalization trunk neural crest cell migration stem cell differentiation mesenchymal cell differentiation trunk segmentation maintenance of synapse structure cell junction maintenance cell junction organization cellular component maintenance synapse organization motor neuron axon guidance branchiomotor neuron axon guidance gonadotrophin-releasing hormone neuronal migration to the hypothalamus hypothalamus development forebrain development central nervous system neuron development central nervous system neuron differentiation hypothalamus cell differentiation hypothalamus gonadotrophin-releasing hormone neuron development limbic system development head development neuron migration forebrain generation of neurons hypothalamus gonadotrophin-releasing hormone neuron differentiation brain development diencephalon development forebrain neuron development central nervous system development hypothalamic tangential migration using cell-axon interactions forebrain neuron differentiation hypothalamus cell migration regulation of cell motility tissue migration negative regulation of epithelial cell migration regulation of cell migration epithelial cell migration regulation of epithelial cell migration negative regulation of cell migration epithelium migration negative regulation of cell motility negative chemotaxis neuron recognition neuron projection fasciculation axonal fasciculation cell recognition olfactory lobe development olfactory bulb development telencephalon development dendrite development dendrite arborization basal dendrite development dendrite morphogenesis basal dendrite arborization neuron projection arborization basal dendrite morphogenesis cranial nerve morphogenesis parasympathetic nervous system development cranial nerve structural organization preganglionic parasympathetic fiber development anatomical structure arrangement facial nerve morphogenesis autonomic nervous system development facial nerve structural organization facial nerve development neural crest cell migration involved in autonomic nervous system development positive regulation of locomotion regulation of neuron migration positive regulation of cell migration positive regulation of cell motility positive regulation of cellular process positive regulation of neuron migration sympathetic nervous system development sympathetic ganglion development sympathetic neuron projection extension trigeminal nerve development trigeminal nerve structural organization trigeminal nerve morphogenesis cellular response to stimulus cell surface receptor signaling pathway semaphorin-plexin signaling pathway signaling cell communication signal transduction epithelium development gland development branching involved in salivary gland morphogenesis morphogenesis of an epithelium salivary gland development dichotomous subdivision of terminal units involved in salivary gland branching tissue morphogenesis gland morphogenesis dichotomous subdivision of an epithelial terminal unit morphogenesis of a branching structure salivary gland morphogenesis animal organ morphogenesis exocrine system development morphogenesis of a branching epithelium synaptic target recognition innervation axonogenesis involved in innervation trigeminal ganglion development neural crest cell migration involved in sympathetic nervous system development	cellular anatomical structure synapse cell junction glutamatergic synapse extracellular region extracellular space cerebellar climbing fiber to Purkinje cell synapse neuron to neuron synapse asymmetric synapse excitatory synapse asymmetric, glutamatergic, excitatory synapse
A [auth E], C [auth F]	Neuropilin-1	cation binding ion binding binding metal ion binding small molecule binding protein binding growth factor binding kinase binding enzyme binding protein kinase binding molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity cation binding ion binding binding metal ion binding small molecule binding protein binding growth factor binding kinase binding enzyme binding protein kinase binding molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups vascular endothelial growth factor receptor activity protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity semaphorin receptor activity vascular endothelial growth factor binding heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	multicellular organismal process cellular developmental process vasculogenesis multicellular organism development tube morphogenesis cell differentiation anatomical structure development cell migration cell motility blood vessel development system development cell migration involved in vasculogenesis developmental process heart development multicellular organismal process cellular developmental process vasculogenesis multicellular organism development tube morphogenesis cell differentiation anatomical structure development cell migration cell motility blood vessel development system development cell migration involved in vasculogenesis developmental process heart development blood vessel morphogenesis tube development animal organ development cell migration involved in coronary vasculogenesis cell migration involved in heart development coronary vasculature development vasculature development circulatory system development anatomical structure morphogenesis vasculogenesis involved in coronary vascular morphogenesis cellular process coronary vasculature morphogenesis cranial ganglion development nervous system development tissue development ganglion development nerve development cranial nerve development facioacoustic ganglion development axon extension regulation of growth regulation of cellular process axonogenesis regulation of cellular component size developmental growth cell projection organization negative regulation of biological process regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell development cell projection morphogenesis neuron differentiation negative regulation of growth neuron projection morphogenesis regulation of biological quality regulation of biological process negative regulation of cellular component organization regulation of cell projection organization negative regulation of cell growth developmental growth involved in morphogenesis generation of neurons negative regulation of axonogenesis negative regulation of developmental growth negative regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization regulation of developmental process plasma membrane bounded cell projection morphogenesis cell development cell growth cell morphogenesis regulation of axon extension cellular component organization regulation of nervous system development neurogenesis negative regulation of neurogenesis regulation of extent of cell growth regulation of axonogenesis negative regulation of cellular process negative regulation of nervous system development regulation of multicellular organismal process negative regulation of cell differentiation cellular component organization or biogenesis negative regulation of cell projection organization regulation of anatomical structure morphogenesis regulation of cell size neuron projection extension regulation of multicellular organismal development regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth negative regulation of developmental process biological regulation growth negative regulation of axon extension axon development regulation of cell growth cell morphogenesis involved in neuron differentiation negative regulation of neuron projection development negative regulation of cell development neuron development regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction endothelial cell migration positive regulation of substrate adhesion-dependent cell spreading regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of substrate adhesion-dependent cell spreading regulation of cell adhesion positive regulation of biological process cell-substrate adhesion cell adhesion positive regulation of cell-substrate adhesion substrate adhesion-dependent cell spreading positive regulation of cellular process artery development artery morphogenesis positive regulation of cellular component organization cell-substrate junction assembly positive regulation of cell-substrate junction organization cellular component biogenesis cellular component assembly cell junction assembly regulation of cell-substrate junction organization focal adhesion assembly positive regulation of focal adhesion assembly positive regulation of cellular component biogenesis positive regulation of cell-matrix adhesion regulation of cellular component biogenesis regulation of cell junction assembly positive regulation of cell junction assembly cell junction organization cell-matrix adhesion regulation of cell-matrix adhesion cell-substrate junction organization regulation of focal adhesion assembly regulation of cell-substrate junction assembly cellular response to stimulus cell surface receptor signaling pathway response to stimulus neuropilin signaling pathway signaling cell communication signal transduction cardiac chamber morphogenesis heart morphogenesis cardiac septum development cardiac septum morphogenesis cardiac chamber development outflow tract septum morphogenesis outflow tract morphogenesis animal organ morphogenesis platelet-derived growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway angiogenesis involved in coronary vascular morphogenesis angiogenesis anatomical structure formation involved in morphogenesis branching morphogenesis of an epithelial tube epithelial tube morphogenesis epithelium development morphogenesis of an epithelium branching involved in blood vessel morphogenesis tissue morphogenesis morphogenesis of a branching structure morphogenesis of a branching epithelium cranial nerve morphogenesis trigeminal nerve development trigeminal nerve morphogenesis neuron recognition neuron projection fasciculation axonal fasciculation cell recognition negative regulation of signaling regulation of signal transduction regulation of programmed cell death extrinsic apoptotic signaling pathway negative regulation of cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway regulation of signaling negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process cell death negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway negative regulation of apoptotic process regulation of response to stimulus regulation of cell communication apoptotic process programmed cell death regulation of apoptotic signaling pathway axon guidance neuron projection guidance sensory neuron axon guidance positive regulation of cell communication positive regulation of signal transduction regulation of platelet-derived growth factor receptor signaling pathway positive regulation of response to stimulus positive regulation of platelet-derived growth factor receptor signaling pathway positive regulation of signaling dendrite development dendrite arborization basal dendrite development dendrite morphogenesis basal dendrite arborization neuron projection arborization basal dendrite morphogenesis sensory organ development retina vasculature development in camera-type eye eye development retina development in camera-type eye visual system development camera-type eye development sensory system development intracellular signal transduction positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade neural crest cell development mesenchyme development mesenchymal cell migration ameboidal-type cell migration autonomic nervous system development neural crest cell migration stem cell development neural crest cell differentiation stem cell differentiation neural crest cell migration involved in autonomic nervous system development mesenchymal cell differentiation retinal ganglion cell axon guidance positive regulation of nervous system development positive regulation of locomotion positive regulation of chemotaxis positive regulation of axon extension involved in axon guidance positive regulation of developmental process taxis positive regulation of cell projection organization positive regulation of developmental growth neuron projection extension involved in neuron projection guidance chemotaxis positive regulation of cell development response to external stimulus response to chemical regulation of locomotion positive regulation of multicellular organismal process regulation of response to external stimulus regulation of axon extension involved in axon guidance positive regulation of response to external stimulus positive regulation of cell differentiation positive regulation of neurogenesis axon extension involved in axon guidance positive regulation of axon extension positive regulation of axonogenesis locomotion positive regulation of cell growth regulation of chemotaxis positive regulation of growth small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction regulation of Cdc42 protein signal transduction regulation of Rho protein signal transduction Rho protein signal transduction Cdc42 protein signal transduction sympathetic nervous system development sympathetic ganglion development regulation of cell motility positive regulation of smooth muscle cell chemotaxis regulation of smooth muscle cell chemotaxis regulation of smooth muscle cell migration positive regulation of smooth muscle cell migration positive regulation of cell migration muscle cell migration positive regulation of cell motility smooth muscle cell chemotaxis regulation of cell migration cell chemotaxis smooth muscle cell migration cellular response to chemical stimulus neuron migration motor neuron migration trigeminal nerve structural organization cranial nerve structural organization anatomical structure arrangement wound healing response to stress response to wounding filopodium assembly regulation of filopodium assembly plasma membrane bounded cell projection assembly positive regulation of filopodium assembly regulation of cell projection assembly regulation of plasma membrane bounded cell projection assembly cell projection assembly positive regulation of plasma membrane bounded cell projection assembly positive regulation of phosphorylation positive regulation of phosphorus metabolic process phosphorylation positive regulation of phosphate metabolic process positive regulation of metabolic process phosphate-containing compound metabolic process metabolic process regulation of phosphorus metabolic process regulation of phosphorylation phosphorus metabolic process regulation of metabolic process retina vasculature morphogenesis in camera-type eye vascular endothelial growth factor receptor signaling pathway trigeminal ganglion development positive regulation of organelle organization regulation of cytoskeleton organization regulation of actin filament-based process regulation of actin filament bundle assembly positive regulation of actin filament bundle assembly actin filament bundle organization positive regulation of stress fiber assembly actin filament-based process stress fiber assembly regulation of actin filament organization actin cytoskeleton organization actomyosin structure organization positive regulation of cytoskeleton organization actin filament organization positive regulation of supramolecular fiber organization regulation of organelle organization regulation of stress fiber assembly organelle organization contractile actin filament bundle assembly regulation of actomyosin structure organization regulation of actin cytoskeleton organization actin filament bundle assembly regulation of supramolecular fiber organization supramolecular fiber organization cytoskeleton organization renal artery morphogenesis kidney vasculature development renal system development renal system vasculature development kidney vasculature morphogenesis kidney development renal system vasculature morphogenesis negative regulation of locomotion negative regulation of chemotaxis negative regulation of axon extension involved in axon guidance negative regulation of response to external stimulus localization protein localization to endosome protein localization to organelle macromolecule localization protein localization to early endosome intracellular protein localization sympathetic neuron projection guidance blastoderm segmentation segmentation pattern specification process embryo development ventral trunk neural crest cell migration embryonic pattern specification regionalization trunk neural crest cell migration trunk segmentation blood vessel endothelial cell migration positive chemotaxis cell migration involved in sprouting angiogenesis sprouting angiogenesis hepatocyte growth factor receptor signaling pathway postsynapse organization synapse organization motor neuron axon guidance branchiomotor neuron axon guidance gonadotrophin-releasing hormone neuronal migration to the hypothalamus hypothalamus development forebrain development central nervous system neuron development central nervous system neuron differentiation hypothalamus cell differentiation hypothalamus gonadotrophin-releasing hormone neuron development limbic system development head development forebrain generation of neurons hypothalamus gonadotrophin-releasing hormone neuron differentiation brain development diencephalon development forebrain neuron development central nervous system development hypothalamic tangential migration using cell-axon interactions forebrain neuron differentiation hypothalamus cell migration cellular response to endogenous stimulus cellular response to growth factor stimulus response to endogenous stimulus cellular response to vascular endothelial growth factor stimulus response to growth factor regulation of blood vessel endothelial cell migration regulation of endothelial cell migration positive regulation of cell migration involved in sprouting angiogenesis regulation of cell migration involved in sprouting angiogenesis positive regulation of blood vessel endothelial cell migration positive regulation of endothelial cell migration vestibulocochlear nerve structural organization vestibulocochlear nerve development vestibulocochlear nerve morphogenesis parasympathetic nervous system development preganglionic parasympathetic fiber development facial nerve morphogenesis facial nerve structural organization facial nerve development endothelial cell chemotaxis ectodermal placode development otic placode development integrin-mediated signaling pathway sympathetic neuron projection extension VEGF-activated neuropilin signaling pathway vascular endothelial growth factor signaling pathway neuron apoptotic process negative regulation of neuron apoptotic process regulation of neuron apoptotic process substrate-dependent cell migration, cell extension substrate-dependent cell migration commissural neuron axon guidance regulation of vascular associated smooth muscle cell migration vascular associated smooth muscle cell migration positive regulation of vascular associated smooth muscle cell migration coronary artery morphogenesis semaphorin-plexin signaling pathway gland development branching involved in salivary gland morphogenesis salivary gland development dichotomous subdivision of terminal units involved in salivary gland branching gland morphogenesis dichotomous subdivision of an epithelial terminal unit salivary gland morphogenesis exocrine system development regulation of vasculature development positive regulation of angiogenesis positive regulation of vasculature development regulation of angiogenesis ganglion morphogenesis dorsal root ganglion morphogenesis dorsal root ganglion development response to hepatocyte growth factor cellular response to hepatocyte growth factor stimulus innervation axonogenesis involved in innervation	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle sorting endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle vesicle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle sorting endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle vesicle anchoring junction cell junction focal adhesion cell-substrate junction cell surface cell periphery plasma membrane membrane postsynapse postsynaptic membrane synapse plasma membrane region synaptic membrane mitochondrial membrane mitochondrion organelle envelope mitochondrial envelope organelle membrane glutamatergic synapse cell projection neuron projection plasma membrane bounded cell projection somatodendritic compartment cell body neuronal cell body axon growth cone distal axon site of polarized growth early endosome polymeric cytoskeletal fiber neurofilament intracellular membraneless organelle intermediate filament cytoskeleton cytoskeleton membraneless organelle intermediate filament supramolecular fiber supramolecular polymer supramolecular complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth A], F [auth B]	IPR002909	IPT domain	Domain
E [auth A], F [auth B]	IPR041362	Plexin, TIG domain 2	Domain
E [auth A], F [auth B]	IPR016201	PSI domain	Domain
E [auth A], F [auth B]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
E [auth A], F [auth B]	IPR008936	Rho GTPase activation protein	Homologous Superfamily
E [auth A], F [auth B]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
E [auth A], F [auth B]	IPR002165	Plexin repeat	Repeat
E [auth A], F [auth B]	IPR041019	Plexin, TIG domain 1	Domain
E [auth A], F [auth B]	IPR031148	Plexin family	Family
E [auth A], F [auth B]	IPR046800	Plexin, cytoplasmic RhoGTPase-binding domain	Domain
E [auth A], F [auth B]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
E [auth A], F [auth B]	IPR013548	Plexin, cytoplasmic RasGAP domain	Domain
E [auth A], F [auth B]	IPR036352	Sema domain superfamily	Homologous Superfamily
E [auth A], F [auth B]	IPR001627	Sema domain	Domain
B [auth C], D	IPR042820	Semaphorin-3A, sema domain	Domain
B [auth C], D	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth C], D	IPR003599	Immunoglobulin domain subtype	Domain
B [auth C], D	IPR041416	IL-1Ra-like, immunoglobulin domain	Domain
B [auth C], D	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth C], D	IPR036352	Sema domain superfamily	Homologous Superfamily
B [auth C], D	IPR007110	Immunoglobulin-like domain	Domain
B [auth C], D	IPR016201	PSI domain	Domain
B [auth C], D	IPR027231	Semaphorin	Family
B [auth C], D	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B [auth C], D	IPR001627	Sema domain	Domain
A [auth E], C [auth F]	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A [auth E], C [auth F]	IPR000859	CUB domain	Domain
A [auth E], C [auth F]	IPR022579	Neuropilin, C-terminal	Domain
A [auth E], C [auth F]	IPR000421	Coagulation factor 5/8, C-terminal domain	Domain
A [auth E], C [auth F]	IPR035914	Spermadhesin, CUB domain superfamily	Homologous Superfamily
A [auth E], C [auth F]	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A [auth E], C [auth F]	IPR014648	Neuropilin	Family
A [auth E], C [auth F]	IPR050633	Neuropilin/Multicopper Oxidase/Coagulation Factor	Family
A [auth E], C [auth F]	IPR000998	MAM domain	Domain