7LU6 | pdb_00007lu6

Crystal structure of the mouse Kirrel3 D1 homodimer

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DED	e7lu6A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
B	DED	e7lu6B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
C	DED	e7lu6C1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
D	DED	e7lu6D1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
E	DED	e7lu6E1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
F	DED	e7lu6F1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
G	DED	e7lu6G1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)
H	DED	e7lu6H1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DED	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF07679	Immunoglobulin I-set domain (I-set)	Immunoglobulin I-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Kin of IRRE-like protein 3	protein binding binding PDZ domain binding protein domain specific binding cell adhesion molecule binding	behavior multicellular organismal process inter-male aggressive behavior aggressive behavior developmental process head development forebrain development animal organ development brain development nervous system development pallium development multicellular organism development central nervous system development anatomical structure development behavior multicellular organismal process inter-male aggressive behavior aggressive behavior developmental process head development forebrain development animal organ development brain development nervous system development pallium development multicellular organism development central nervous system development anatomical structure development telencephalon development hippocampus development limbic system development system development cellular developmental process hemopoiesis cell differentiation cell development cellular process principal sensory nucleus of trigeminal nerve development trigeminal sensory nucleus development neural nucleus development cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis plasma membrane bounded cell projection organization generation of neurons anatomical structure morphogenesis neuron development renal system development glomerulus development glomerulus morphogenesis nephron development kidney development cell adhesion cell-cell adhesion homophilic cell-cell adhesion neuron migration cell migration cell motility cellular component biogenesis cell junction organization cellular component assembly cell junction assembly synapse organization synapse assembly	cellular anatomical structure membrane cell-cell junction anchoring junction cell junction cell periphery plasma membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection extracellular region cellular anatomical structure membrane cell-cell junction anchoring junction cell junction cell periphery plasma membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection extracellular region dendritic shaft axon membrane-bounded organelle intracellular anatomical structure transport vesicle synapse intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle presynapse cytoplasmic vesicle synaptic vesicle organelle secretory vesicle cytoplasm vesicle exocytic vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003598	Immunoglobulin subtype 2	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003599	Immunoglobulin domain subtype	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013098	Immunoglobulin I-set	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR051275	Cellular adhesion and signaling domain-containing protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013162	CD80-like, immunoglobulin C2-set	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR007110	Immunoglobulin-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.