7LIH | pdb_00007lih

CryoEM structure of Mayaro virus icosahedral subunit

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth G]AAA_lid_RFC1e7lihG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
I [auth E]AAA_lid_RFC1e7lihE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
F [auth D]AAA_lid_RFC1e7lihD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
C [auth M]ABC_trane7lihM01 A: alpha arraysX: Histone-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: ABC_tranECOD (v295)
K [auth J]I-sete7lihJ1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
H [auth I]I-sete7lihI1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
E [auth H]I-sete7lihH1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
B [auth T]WD40, eIF2A, ANAPC4_WD40e7lihT1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: WD40, eIF2A, ANAPC4_WD40ECOD (v295)
J [auth C]I-sete7lihC1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
G [auth B]I-sete7lihB1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
D [auth A]I-sete7lihA1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (v295)
A [auth F]WD40, eIF2A, ANAPC4_WD40e7lihF1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: WD40, eIF2A, ANAPC4_WD40ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth M],
F [auth D],
I [auth E],
L [auth G]		E2 protein
B [auth T],
E [auth H],
H [auth I],
K [auth J]		E1 protein
A [auth F],
D [auth A],
G [auth B],
J [auth C]		Capsid protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR002533Alphavirus E3 spike glycoproteinDomain
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR009003Peptidase S1, PA clanHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR000936Alphavirus E2 glycoproteinFamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR000930Peptidase S3, togavirinDomain
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR014756Immunoglobulin E-setHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR002548Alphavirus E1 glycoproteinDomain
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
C [auth M],
F [auth D],
I [auth E],
L [auth G]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR002533Alphavirus E3 spike glycoproteinDomain
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR000936Alphavirus E2 glycoproteinFamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR000930Peptidase S3, togavirinDomain
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR014756Immunoglobulin E-setHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR002548Alphavirus E1 glycoproteinDomain
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
B [auth T],
E [auth H],
H [auth I],
K [auth J]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR002533Alphavirus E3 spike glycoproteinDomain
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR014756Immunoglobulin E-setHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR000936Alphavirus E2 glycoproteinFamily
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR000930Peptidase S3, togavirinDomain
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR002548Alphavirus E1 glycoproteinDomain
A [auth F],
D [auth A],
G [auth B],
J [auth C]		IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneBitopic proteinsViral membrane fusion glycoproteinAlphavirus E1 glycoprotein

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
MemProtMDAnnotated as membrane protein by MemProtMD