Annotations: 7LGG

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
O	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RNA bacteriophage capsid protein	8035305	3001853	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
O	Levi_coat	e7lggO1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
N	Levi_coat	e7lggN1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
M	Levi_coat	e7lggM1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
L	Levi_coat	e7lggL1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
K	Levi_coat	e7lggK1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
J	Levi_coat	e7lggJ1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
I	Levi_coat	e7lggI1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
H	Levi_coat	e7lggH1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
G	Levi_coat	e7lggG1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
F	Levi_coat	e7lggF1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
E	Levi_coat	e7lggE1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
D	Levi_coat	e7lggD1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
C	Levi_coat	e7lggC1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
B	Levi_coat	e7lggB1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)
A	Levi_coat	e7lggA1	A: a+b two layers	X: RNA bacteriophage capsid protein (From Topology)	H: RNA bacteriophage capsid protein (From Topology)	T: RNA bacteriophage capsid protein	F: Levi_coat	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	PF01819	Levivirus coat protein (Levi_coat)	Levivirus coat protein	The Levivirus coat protein forms the bacteriophage coat that encapsidates the viral RNA. 180 copies of this protein form the virion shell. The MS2 bacteriophage coat protein controls two distinct processes: sequence-specific RNA encapsidation and re ...	The Levivirus coat protein forms the bacteriophage coat that encapsidates the viral RNA. 180 copies of this protein form the virion shell. The MS2 bacteriophage coat protein controls two distinct processes: sequence-specific RNA encapsidation and repression of replicase translation-by binding to an RNA stem-loop structure of 19 nucleotides containing the initiation codon of the replicase gene. The binding of a coat protein dimer to this hairpin shuts off synthesis of the viral replicase, switching the viral replication cycle to virion assembly rather than continued replication [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	Capsid protein	structural molecule activity translation regulator activity translation repressor activity RNA binding binding nucleic acid binding	-	viral capsid T=3 icosahedral viral capsid icosahedral viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR002703	Levivirus coat protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR015954	Bacteriophage RNA-type, capsid	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.