Osmoporin OmpC from E.coli K12
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth A] | d7jz3a_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
| B [auth C] | d7jz3c_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
| A [auth B] | d7jz3b_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth A] | SCOP2 Family | Porin | 8102364 | 4003061 | SCOP2 (2022-06-29) |
| C [auth A] | SCOP2 Superfamily | Porins | 8102365 | 3000224 | SCOP2 (2022-06-29) |
| B [auth C] | SCOP2B Superfamily | Porins | 8102365 | 3000224 | SCOP2B (2022-06-29) |
| A [auth B] | SCOP2B Superfamily | Porins | 8102365 | 3000224 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth A] | CENP-T_C | e7jz3A1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CENP-T_C | ECOD (develop294) |
| B [auth C] | CENP-T_C | e7jz3C1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CENP-T_C | ECOD (develop294) |
| A [auth B] | CENP-T_C | e7jz3B1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CENP-T_C | ECOD (develop294) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth B], B [auth C], C [auth A] | Outer membrane protein C |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], B [auth C], C [auth A] | IPR050298 | Gram-negative bacterial outer membrane porin | Family |
| A [auth B], B [auth C], C [auth A] | IPR023614 | Porin domain superfamily | Homologous Superfamily |
| A [auth B], B [auth C], C [auth A] | IPR001702 | Porin, Gram-negative type | Family |
| A [auth B], B [auth C], C [auth A] | IPR013793 | Porin, Gram-negative type, conserved site | Conserved Site |
| A [auth B], B [auth C], C [auth A] | IPR001897 | Porin, gammaproteobacterial | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Beta-barrel transmembrane | Trimeric porins (n=16,S=20) | General Bacterial Porin (GBP) |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Beta-Barrel Membrane Proteins: Porins and Relatives | OmpC Osmoporin |
