Radial spoke 1 isolated from Chlamydomonas reinhardtii
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| AA [auth a] | SCOP2B Superfamily | DLC-like | 8102170 | 3000821 | SCOP2B (2022-06-29) |
| CA [auth c] | SCOP2B Superfamily | DLC-like | 8102170 | 3000821 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | DLC-like | 8102170 | 3000821 | SCOP2B (2022-06-29) |
| BA [auth b] | SCOP2B Superfamily | DLC-like | 8102170 | 3000821 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M | RIIa | e7jtkM1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: RIIa | ECOD (develop294) |
| N | RIIa | e7jtkN1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: RIIa | ECOD (develop294) |
| JA [auth u] | CENP-T_C | e7jtku1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CENP-T_C | ECOD (develop294) |
| KA [auth v] | CENP-T_C | e7jtkv1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CENP-T_C | ECOD (develop294) |
| HA [auth k] | Cpn60_TCP1 | e7jtkk01 | A: alpha bundles | X: Rossmann-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Cpn60_TCP1 | ECOD (develop294) |
| FA [auth i] | Dpy-30 | e7jtki1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| GA [auth j] | Dpy-30 | e7jtkj1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| AA [auth a] | Dpy-30 | e7jtka1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| CA [auth c] | Dpy-30 | e7jtkc1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| DA [auth d] | Dpy-30 | e7jtkd1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| BA [auth b] | Dpy-30 | e7jtkb1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| LA [auth y] | Dpy-30 | e7jtky1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| MA [auth z] | Dpy-30 | e7jtkz1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| X | Cpn60_TCP1 | e7jtkX01 | A: alpha bundles | X: Rossmann-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Cpn60_TCP1 | ECOD (develop294) |
| W | Dpy-30 | e7jtkW1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
| U | Dpy-30 | e7jtkU1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Dpy-30 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| FA [auth i] | 3.30.70.141 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleoside diphosphate kinase-like domain | CATH (utative) |
| GA [auth j] | 3.30.70.141 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Nucleoside diphosphate kinase-like domain | CATH (utative) |
| U | 1.20.890.10 | Mainly Alpha | Up-down Bundle | cAMP-dependent Protein Kinase, Chain A | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02493 | MORN repeat (MORN) | MORN repeat | - | Repeat | |
| PF02197 | Regulatory subunit of type II PKA R-subunit (RIIa) | Regulatory subunit of type II PKA R-subunit | Domain | ||
| PF00173 | Cytochrome b5-like Heme/Steroid binding domain (Cyt-b5) | Cytochrome b5-like Heme/Steroid binding domain | This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors such as Swiss:O00264 [1,2]. Many members of this subfamily are membrane a ... | Domain | |
| PF00334 | Nucleoside diphosphate kinase (NDK) | Nucleoside diphosphate kinase | Domain | ||
| LA [auth y], MA [auth z], Y, Z | PF00226 | DnaJ domain (DnaJ) | DnaJ domain | DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ... | Domain |
| LA [auth y], MA [auth z], Y, Z | PF01556 | DnaJ C terminal domain (DnaJ_C) | DnaJ C terminal domain | This family consists of the C terminal region of the DnaJ protein. It is always found associated with Pfam:PF00226 and Pfam:PF00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after ... | Domain |
| PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain | |
| PF02197 | Regulatory subunit of type II PKA R-subunit (RIIa) | Regulatory subunit of type II PKA R-subunit | Domain | ||














