Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyRecA-like P-loop NTPases8103685 3002019 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyMss4-like8103682 3001994 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyRecA-like P-loop NTPases8103684 3002019 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]PF11648e7jl0A3 A: beta complex topologyX: ETN0001 domain-like (From Homology)H: ETN0001 domain-likeT: Mss4-likeF: PF11648ECOD (1.6)
C [auth A]PF18119e7jl0A2 A: alpha bundlesX: Helical bundle insertion in helicase domainsH: Helical bundle in Hef helicase (From Topology)T: Helical bundle in Hef helicaseF: PF18119ECOD (1.6)
C [auth A]PF00271e7jl0A4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00271ECOD (1.6)
C [auth A]PF04851e7jl0A1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF04851ECOD (1.6)
D [auth B]PF00622e7jl0B1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: PF00622ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
C [auth A]PF04851Type III restriction enzyme, res subunit (ResIII)Type III restriction enzyme, res subunit- Family
C [auth A]PF11648C-terminal domain of RIG-I (RIG-I_C-RD)C-terminal domain of RIG-IThis family of proteins represents the regulatory domain RD of RIG-I, a protein which initiates a signalling cascade that provides essential antiviral protection for the host. The RD domain binds viral RNA, activating the RIG-I ATPase by RNA-dependan ...This family of proteins represents the regulatory domain RD of RIG-I, a protein which initiates a signalling cascade that provides essential antiviral protection for the host. The RD domain binds viral RNA, activating the RIG-I ATPase by RNA-dependant dimerisation. The structure of RD contains a zinc-binding domain and is thought to confer ligand specificity [1].
Domain
C [auth A]PF18119RIG-I receptor C-terminal domain (RIG-I_C)RIG-I receptor C-terminal domainThis is the C-terminal domain of Innate Immune Pattern-Recognition Receptor RIG-I present in homo sapiens. RIG-I is a key cytosolic pattern-recognition receptors of the vertebrate innate immune system that form the first line of defense against RNA v ...This is the C-terminal domain of Innate Immune Pattern-Recognition Receptor RIG-I present in homo sapiens. RIG-I is a key cytosolic pattern-recognition receptors of the vertebrate innate immune system that form the first line of defense against RNA viral infection. RNA binding to RIG-I is mediated both by the C-terminal domain and by the helicase domain. The C-terminal domain specifically binds the 5'triphosphate end with a 10-fold higher affinity compared to 5'OH-dsRNA [1].
Domain
D [auth B]PF00622SPRY domain (SPRY)SPRY domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth X]RNA (5'-R(P*GP*AP*CP*UP*GP*AP*CP*UP*GP*AP*CP*UP*GP*A)-3')---
B [auth Y]RNA (5'-R(P*UP*CP*AP*GP*UP*CP*AP*GP*UP*CP*AP*GP*UP*C)-3')---
C [auth A]Interferon-induced helicase C domain-containing protein 1
D [auth B]Tripartite motif-containing protein 65