Crystal structure of the L780 UDP-rhamnose synthase from Acanthamoeba polyphaga mimivirus
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Pyr_redox_2 | e7jidA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pyr_redox_2 | ECOD (v294.1) |
| B | Pyr_redox_2 | e7jidB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Pyr_redox_2 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04321 | RmlD substrate binding domain (RmlD_sub_bind) | RmlD substrate binding domain | L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucl ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| UDP-L-Rhamnose Synthase |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
| IPR029903 | RmlD-like, substrate binding domain | Domain | |
| IPR005913 | dTDP-4-dehydrorhamnose reductase | Family |














