Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 3.4 A
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e7jgdA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: | ECOD (v294.1) | |
| A | UCR_14kD | e7jgdA5 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: UCR_14kD | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.1310.20 | Mainly Alpha | Up-down Bundle | 5 helical Cullin repeat like | Duffy-antigen binding domain | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Erythrocyte membrane protein 1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR008602 | Duffy-antigen binding domain | Domain | |
| IPR044932 | Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment superfamily | Homologous Superfamily | |
| IPR042202 | Duffy-antigen binding superfamily | Homologous Superfamily | |
| IPR032761 | Plasmodium falciparum erythrocyte membrane protein 1, N-terminal | Domain | |
| IPR029211 | Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment | Domain |
