7F9O | pdb_00007f9o

PSI-NDH supercomplex of Barley


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
WA [auth m]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106356 3000824 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106356 3000824 SCOP2B (2022-06-29)
VA [auth l]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106354 3000819 SCOP2B (2022-06-29)
H [auth I]SCOP2 FamilySubunit VIII of photosystem I reaction centre, PsaI 8106353 4002098 SCOP2 (2022-06-29)
H [auth I]SCOP2 SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106354 3000819 SCOP2 (2022-06-29)
TA [auth j]SCOP2 FamilySubunit III of photosystem I reaction centre, PsaF 8106231 4002091 SCOP2 (2022-06-29)
TA [auth j]SCOP2 SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106232 3000813 SCOP2 (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106232 3000813 SCOP2B (2022-06-29)
SA [auth i]SCOP2 FamilyPhotosystem I accessory protein E (PsaE) 8106233 4001749 SCOP2 (2022-06-29)
SA [auth i]SCOP2 SuperfamilyElectron transport accessory proteins 8106234 3000325 SCOP2 (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8106234 3000325 SCOP2B (2022-06-29)
CB [auth s]SCOP2 FamilyChlorophyll a-b binding protein 8106151 4001763 SCOP2 (2022-06-29)
CB [auth s]SCOP2 SuperfamilyChlorophyll a-b binding protein 8106152 3000343 SCOP2 (2022-06-29)
BB [auth r]SCOP2B SuperfamilyChlorophyll a-b binding protein 8106340 3000343 SCOP2B (2022-06-29)
RA [auth h]SCOP2B SuperfamilyPhotosystem I subunit PsaD 8106238 3000951 SCOP2B (2022-06-29)
DSCOP2 FamilyPhotosystem I subunit PsaD 8106237 4003498 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyPhotosystem I subunit PsaD 8106238 3000951 SCOP2 (2022-06-29)
IA [auth d]SCOP2 FamilyCyclophilin peptidylprolyl isomerase-like 8106149 4000390 SCOP2 (2022-06-29)
IA [auth d]SCOP2 SuperfamilyCyclophilin-like 8106150 3000168 SCOP2 (2022-06-29)
QA [auth g]SCOP2B Superfamily4Fe-4S ferredoxins 8106352 3000020 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8106352 3000020 SCOP2B (2022-06-29)
W [auth S]SCOP2 FamilyNqo4-like 8106361 4000433 SCOP2 (2022-06-29)
W [auth S]SCOP2 SuperfamilyHydB/Nqo4-like 8106362 3001849 SCOP2 (2022-06-29)
T [auth P]SCOP2 FamilyNADH-quinone oxidoreductase NDH subunit 11-like 8106357 4005793 SCOP2 (2022-06-29)
T [auth P]SCOP2 SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8106358 3002200 SCOP2 (2022-06-29)
PA [auth f]SCOP2 FamilyPhotosystem I subunits PsaA/PsaB 8106363 4002118 SCOP2 (2022-06-29)
PA [auth f]SCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB 8106364 3000850 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106364 3000850 SCOP2B (2022-06-29)
R [auth N]SCOP2 FamilyNADH-ubiquinone oxidoreductase chain 3-like 8107017 4005842 SCOP2 (2022-06-29)
R [auth N]SCOP2 SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8107018 3002200 SCOP2 (2022-06-29)
N [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein 8106154 3000343 SCOP2B (2022-06-29)
AB [auth q]SCOP2B SuperfamilyChlorophyll a-b binding protein 8106154 3000343 SCOP2B (2022-06-29)
M [auth 2]SCOP2B SuperfamilyChlorophyll a-b binding protein 8106290 3000343 SCOP2B (2022-06-29)
ZA [auth p]SCOP2 FamilyChlorophyll a-b binding protein 8106047 4001763 SCOP2 (2022-06-29)
ZA [auth p]SCOP2 SuperfamilyChlorophyll a-b binding protein 8106048 3000343 SCOP2 (2022-06-29)
YA [auth o]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI, PsaL 8106236 3000870 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI, PsaL 8106236 3000870 SCOP2B (2022-06-29)
OA [auth e]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106360 3000850 SCOP2B (2022-06-29)
ASCOP2 FamilyPhotosystem I subunits PsaA/PsaB 8106359 4002118 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB 8106360 3000850 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
WA [auth m]PSI_PsaJe7f9om1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PSI_PsaJECOD (1.6)
I [auth J]PSI_PsaJe7f9oJ1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PSI_PsaJECOD (1.6)
VA [auth l]PSI_8e7f9ol1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PSI_8ECOD (1.6)
H [auth I]PSI_8e7f9oI1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PSI_8ECOD (1.6)
UA [auth k]PSI_PsaHe7f9ok1 A: extended segmentsX: Subunit VI of Photosystem I reaction centre (From Topology)H: Subunit VI of Photosystem I reaction centre (From Topology)T: Subunit VI of Photosystem I reaction centreF: PSI_PsaHECOD (1.6)
G [auth H]PSI_PsaHe7f9oH1 A: extended segmentsX: Subunit VI of Photosystem I reaction centre (From Topology)H: Subunit VI of Photosystem I reaction centre (From Topology)T: Subunit VI of Photosystem I reaction centreF: PSI_PsaHECOD (1.6)
TA [auth j]PSI_PsaFe7f9oj1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PSI_PsaFECOD (1.6)
FPSI_PsaFe7f9oF1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PSI_PsaFECOD (1.6)
SA [auth i]PSI_PsaEe7f9oi1 A: beta barrelsX: SH3H: SH3T: SH3F: PSI_PsaEECOD (1.6)
EPSI_PsaEe7f9oE1 A: beta barrelsX: SH3H: SH3T: SH3F: PSI_PsaEECOD (1.6)
CB [auth s]Chloroa_b-binde7f9os1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
BB [auth r]Chloroa_b-binde7f9or1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
RA [auth h]PsaDe7f9oh1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PsaDECOD (1.6)
DPsaDe7f9oD1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PsaDECOD (1.6)
LA [auth 8]Fer2e7f9o81 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
KA [auth 7]F_UNCLASSIFIEDe7f9o71 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: supersandwich (From Topology)T: supersandwichF: F_UNCLASSIFIEDECOD (1.6)
JA [auth 6]Glyco_transf_9_Ce7f9o61 A: a/b three-layered sandwichesX: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)T: UDP-Glycosyltransferase/glycogen phosphorylaseF: Glyco_transf_9_CECOD (1.6)
JA [auth 6]Glyco_transf_9_Ne7f9o62 A: a/b three-layered sandwichesX: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)T: UDP-Glycosyltransferase/glycogen phosphorylaseF: Glyco_transf_9_NECOD (1.6)
IA [auth d]Pro_isomerasee7f9od1 A: beta barrelsX: Cyclophilin-like (From Topology)H: Cyclophilin-like (From Topology)T: Cyclophilin-likeF: Pro_isomeraseECOD (1.6)
HA [auth 4]FKBP_Ce7f9o41 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: FKBP_CECOD (1.6)
GA [auth c]PsbQe7f9oc1 A: alpha bundlesX: Four-helical up-and-down bundleH: Oxygen-evolving enhancer protein 3 (From Topology)T: Oxygen-evolving enhancer protein 3F: PsbQECOD (1.6)
FA [auth b]PsbQe7f9ob1 A: alpha bundlesX: Four-helical up-and-down bundleH: Oxygen-evolving enhancer protein 3 (From Topology)T: Oxygen-evolving enhancer protein 3F: PsbQECOD (1.6)
EA [auth a]PsbPe7f9oa1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PsbPECOD (1.6)
QA [auth g]Fer4_21_1e7f9og1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
CFer4_21_1e7f9oC1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
Y [auth U]Complex1_30kDae7f9oU1 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: Complex1_30kDaECOD (1.6)
X [auth T]Fer4_21_1e7f9oT1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
W [auth S]Complex1_49kDa_1ste7f9oS1 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: Complex1_49kDa_1stECOD (1.6)
W [auth S]NuoDe7f9oS3 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: NuoDECOD (1.6)
W [auth S]Complex1_49kDa_2nde7f9oS2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: Complex1_49kDa_2ndECOD (1.6)
V [auth R]Oxidored_q3e7f9oR1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: Oxidored_q3ECOD (1.6)
U [auth Q]Proton_antipo_Me7f9oQ1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
T [auth P]Oxidored_q2e7f9oP1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: Oxidored_q2ECOD (1.6)
PA [auth f]PsaA_PsaB_Ce7f9of2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
PA [auth f]PsaA_PsaB_Ne7f9of1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)
BPsaA_PsaB_Ce7f9oB2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
BPsaA_PsaB_Ne7f9oB1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)
S [auth O]Proton_antipo_Me7f9oO1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
R [auth N]Oxidored_q4e7f9oN1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: Oxidored_q4ECOD (1.6)
Q [auth M]Proton_antipo_Me7f9oM1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
P [auth G]NADHdhe7f9oG1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: NADHdhECOD (1.6)
O [auth 5]Chloroa_b-binde7f9o51 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
N [auth 3]Chloroa_b-binde7f9o31 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
AB [auth q]Chloroa_b-binde7f9oq1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
M [auth 2]Chloroa_b-binde7f9o21 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
ZA [auth p]Chloroa_b-binde7f9op1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
L [auth 1]Chloroa_b-binde7f9o11 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
YA [auth o]PsaLe7f9oo1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PsaLECOD (1.6)
K [auth L]PsaLe7f9oL1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PsaLECOD (1.6)
XA [auth n]PSI_PSAKe7f9on1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PSI_PSAKECOD (1.6)
J [auth K]PSI_PSAKe7f9oK1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PSI_PSAKECOD (1.6)
OA [auth e]PsaA_PsaB_Ce7f9oe2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
OA [auth e]PsaA_PsaB_Ne7f9oe1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)
APsaA_PsaB_Ce7f9oA2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
APsaA_PsaB_Ne7f9oA1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D,
RA [auth h]
PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain
BA [auth X]PF10664Cyanobacterial and plastid NDH-1 subunit M (NdhM)Cyanobacterial and plastid NDH-1 subunit MThe proton-pumping NADH:ubiquinone oxidoreductase catalyses the electron transfer from NADH to ubiquinone linked with proton translocation across the membrane. It is the largest, most complex and least understood of the respiratory chain enzymes and ...The proton-pumping NADH:ubiquinone oxidoreductase catalyses the electron transfer from NADH to ubiquinone linked with proton translocation across the membrane. It is the largest, most complex and least understood of the respiratory chain enzymes and is referred to as Complex I. The subunit composition of the enzyme varies between groups of organisms. Complex I originating from mammalian mitochondria contains 45 different proteins, whereas in bacteria, the corresponding complex NDH-1 consists of 14 different polypeptides. Homologues of these 14 proteins are found among subunits of the mitochondrial complex I, and therefore bacterial NDH-1 might be considered a model proton-pumping NADH dehydrogenase with a minimal set of subunits. Escherichia coli NDH-1 readily disintegrates into 3 sub-complexes: a water-soluble NADH dehydrogenase fragment (NuoE, -F, and -G),the connecting fragment (NuoB, -C, -D, and -I), and the membrane fragment (NuoA, -H, -J, -K, -L, -M, -N). In cyanobacteria and their descendants, the chloroplasts of green plants, the subunit composition of NDH-1 remains obscure. The genes for eleven subunits NdhA-NdhK, homologous to the NuoA-NuoD and NuoH-NuoN of the E. coli complex, have been found in the genome of Synechocystis sp. PCC 6803 which has a family of 6 ndhD genes and a family of 3 ndhF genes. Two reported multisubunit complexes, NDH-1L and NDH-1M, represent distinct NDH-1 complexes in the thylakoid membrane of Synechocystis 6803 -cyanobacterium. NDH-1L was shown to be essential for photoheterotrophic cell growth, whereas expression of NDH-1M was a prerequisite for CO2 uptake and played an important role in growth of cells at low CO2. Here we report the subunit composition of these two complexes. Fifteen proteins were discovered in NDH-1L including NdhL, a new component of the membrane fragment, and Ssl1690 (designated as NdhO), a novel peripheral subunit [1]. The cyanobacterial NDH-1 complex contains additional subunits, NdhM and NdhN, compared with the minimal set of the bacterial enzyme and these seem to be specific for thylakoid-located NDH-1 of photosynthetic organisms [2]. The three subunits of NDH-1, NdhM, NdhN and NdhO are essential for effecting cyclic electron flow around photosystem I, by supplying extra-ATP for photosynthesis in both plastids and cyanobacteria [3, 4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth J],
WA [auth m]
Photosystem I reaction center subunit IX-
H [auth I],
VA [auth l]
Photosystem I reaction center subunit VIII-
G [auth H],
UA [auth k]
Photosystem I reaction center subunit VI, chloroplastic-
F,
TA [auth j]
Photosystem I reaction center subunit III, chloroplastic-
E,
SA [auth i]
Photosystem I reaction center subunit IV, chloroplastic-
CB [auth s]Chlorophyll a-b binding protein, chloroplastic
BB [auth r]Chlorophyll a-b binding protein Lhca4
NA [auth 0]Photosynthetic NDH subunit of subcomplex B5-
D,
RA [auth h]
Photosystem I reaction center subunit II, chloroplastic
MA [auth 9]Photosynthetic NDH subunit of subcomplex B4---
LA [auth 8]Photosynthetic NDH subunit of subcomplex B3 -
KA [auth 7]Photosynthetic NDH subunit of subcomplex B2 -
JA [auth 6]Photosynthetic NDH subunit of subcomplex B1-
IA [auth d]Photosynthetic NDH subunit of subcomplex L5
HA [auth 4]Photosynthetic NDH subunit of subcomplex L4---
GA [auth c]Photosynthetic NDH subunit of subcomplex L2---
FA [auth b]Photosynthetic NDH subunit of subcomplex L2
EA [auth a]Photosynthetic NDH subunit of subcomplex L1---
DA [auth Z]Unidentified stromal protein---
C,
QA [auth g]
Photosystem I iron-sulfur center
CA [auth Y]NAD(P)H-quinone oxidoreductase subunit N, chloroplastic---
BA [auth X]NAD(P)H-quinone oxidoreductase subunit M, chloroplastic -
AA [auth W]NAD(P)H-quinone oxidoreductase subunit L, chloroplastic -
Z [auth V]NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Y [auth U]NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
X [auth T]NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
W [auth S]NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
V [auth R]NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic -
U [auth Q]NADH-plastoquinone oxidoreductase subunit 5
T [auth P]NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic
B,
PA [auth f]
Photosystem I P700 chlorophyll a apoprotein A2
S [auth O]NAD(P)H-quinone oxidoreductase chain 4, chloroplastic
R [auth N]NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Q [auth M]NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
P [auth G]NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
O [auth 5]Chlorophyll a-b binding protein Lhca5---
AB [auth q],
N [auth 3]
Chlorophyll a-b binding protein, chloroplastic
M [auth 2]Chlorophyll a-b binding protein, chloroplastic
L [auth 1],
ZA [auth p]
Chlorophyll a-b binding protein Lhca1---
K [auth L],
YA [auth o]
Photosystem I reaction center subunit XI, chloroplastic-
J [auth K],
XA [auth n]
Photosystem I reaction center subunit psaK, chloroplastic-
A,
OA [auth e]
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth J],
WA [auth m]
IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
I [auth J],
WA [auth m]
IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
H [auth I],
VA [auth l]
IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
H [auth I],
VA [auth l]
IPR001302Photosystem I reaction centre subunit VIIIFamily
G [auth H],
UA [auth k]
IPR004928Photosystem I PsaH, reaction centre subunit VIFamily
F,
TA [auth j]
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
F,
TA [auth j]
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
E,
SA [auth i]
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
E,
SA [auth i]
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
CB [auth s]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
CB [auth s]IPR022796Chlorophyll A-B binding proteinFamily
BB [auth r]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
BB [auth r]IPR022796Chlorophyll A-B binding proteinFamily
NA [auth 0]IPR034569Photosynthetic NDH subunit of subcomplex B 5, chloroplasticFamily
D,
RA [auth h]
IPR003685Photosystem I PsaDFamily
D,
RA [auth h]
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
LA [auth 8]IPR001055Adrenodoxin-likeFamily
LA [auth 8]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
LA [auth 8]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
LA [auth 8]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
KA [auth 7]IPR014718Glycoside hydrolase-type carbohydrate-bindingHomologous Superfamily
KA [auth 7]IPR011013Galactose mutarotase-like domain superfamilyHomologous Superfamily
JA [auth 6]IPR044983Photosynthetic NDH subunit of subcomplex B 1, chloroplasticFamily
IA [auth d]IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
IA [auth d]IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
IA [auth d]IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteConserved Site
FA [auth b]IPR008797Oxygen-evolving enhancer protein 3Family
FA [auth b]IPR054099Oxygen-evolving enhancer protein 3, plantsFamily
FA [auth b]IPR023222PsbQ-like domain superfamilyHomologous Superfamily
C,
QA [auth g]
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
C,
QA [auth g]
IPR050157Photosystem I iron-sulfur centerFamily
C,
QA [auth g]
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
C,
QA [auth g]
IPR017491Photosystem I protein PsaCFamily
BA [auth X]IPR018922NAD(P)H-quinone oxidoreductase subunit MFamily
AA [auth W]IPR019654NAD(P)H-quinone oxidoreductase subunit LFamily
Z [auth V]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
Z [auth V]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
Y [auth U]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
Y [auth U]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
Y [auth U]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
Y [auth U]IPR010218NADH dehydrogenase, subunit CFamily
X [auth T]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
X [auth T]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
X [auth T]IPR004497NAD(P)H-quinone oxidoreductase subunit IFamily
X [auth T]IPR010226NADH-quinone oxidoreductase, chain IFamily
W [auth S]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
W [auth S]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
W [auth S]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
W [auth S]IPR001135NADH-quinone oxidoreductase, subunit DDomain
V [auth R]IPR050290NAD(P)H-quinone oxidoreductase subunit 6, plantFamily
V [auth R]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
V [auth R]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
U [auth Q]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
U [auth Q]IPR002128NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminalDomain
U [auth Q]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
U [auth Q]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
U [auth Q]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
T [auth P]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
T [auth P]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
B,
PA [auth f]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
B,
PA [auth f]
IPR001280Photosystem I PsaA/PsaBFamily
B,
PA [auth f]
IPR006244Photosystem I PsaBFamily
B,
PA [auth f]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
S [auth O]IPR022997NADH-quinone oxidoreductase chain 4Family
S [auth O]IPR003918NADH:ubiquinone oxidoreductaseFamily
S [auth O]IPR010227NADH-quinone oxidoreductase, chain M/4Family
S [auth O]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
R [auth N]IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
R [auth N]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
R [auth N]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
Q [auth M]IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
Q [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
Q [auth M]IPR045693NAD(P)H-quinone oxidoreductase subunit 2, N-terminalDomain
P [auth G]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
P [auth G]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
AB [auth q],
N [auth 3]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
AB [auth q],
N [auth 3]
IPR022796Chlorophyll A-B binding proteinFamily
M [auth 2]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 2]IPR022796Chlorophyll A-B binding proteinFamily
K [auth L],
YA [auth o]
IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
K [auth L],
YA [auth o]
IPR022980Photosystem I, reaction centre subunit XIFamily
K [auth L],
YA [auth o]
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
J [auth K],
XA [auth n]
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
J [auth K],
XA [auth n]
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
J [auth K],
XA [auth n]
IPR000549Photosystem I reaction center subunit V/PsaKFamily
J [auth K],
XA [auth n]
IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
J [auth K],
XA [auth n]
IPR017493Photosystem I reaction center subunit psaK, plantFamily
A,
OA [auth e]
IPR006243Photosystem I PsaAFamily
A,
OA [auth e]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
A,
OA [auth e]
IPR001280Photosystem I PsaA/PsaBFamily
A,
OA [auth e]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site