7F87 | pdb_00007f87

Crystal structure of housekeeping sortase SrtA bound with self derived tripeptide from Lactobacillus rhamnosus GG

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilySortase 8106770 3000481 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySortase 8106770 3000481 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSortasee7f87B1 A: beta barrelsX: Sortase (From Topology)H: Sortase (From Topology)T: SortaseF: SortaseECOD (1.6)
ASortasee7f87A1 A: beta barrelsX: Sortase (From Topology)H: Sortase (From Topology)T: SortaseF: SortaseECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF04203Sortase domain (Sortase)Sortase domainThe founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth F],
D [auth G]		Self Derived Peptide---
A, B
Class A sortase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR023365Sortase domain superfamilyHomologous Superfamily
A, B
IPR042007Sortase AFamily
A, B
IPR005754Sortase familyFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
CSD Parent Component: CYS

RESID:  AA0262

PSI-MOD :  L-cysteine sulfinic acid MOD:00267