7ETO | pdb_00007eto

C1 CVSC-binding penton vertex in the virion capsid of Human Cytomegalovirus

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	AAA_lid_RFC1	e7etoZ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
Y	AAA_lid_RFC1	e7etoY1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
X [auth D]	AAA_lid_RFC1	e7etoD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
W [auth C]	AAA_lid_RFC1	e7etoC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
V [auth B]	AAA_lid_RFC1	e7etoB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
U [auth A]	AAA_lid_RFC1	e7etoA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
T [auth a]	AAA_lid_RFC1	e7etoa1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
L [auth O]	AAA_lid_RFC1	e7etoO1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
K [auth N]	AAA_lid_RFC1	e7etoN1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], Y, Z	Major capsid protein	structural molecule activity	-	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle viral capsid icosahedral viral capsid virion component T=16 icosahedral viral capsid
N [auth Q], O [auth R], P [auth S], Q [auth T], R [auth i], N [auth Q], O [auth R], P [auth S], Q [auth T], R [auth i], S [auth j]	Small capsomere-interacting protein	-	viral process	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle
K [auth N], L [auth O]	Capsid vertex component 2	-	exit from host cell biological process involved in interspecies interaction between organisms viral process viral release from host cell viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction viral penetration into host nucleus intracellular transport of virus transport of virus symbiont entry into host cell symbiont entry into host virion assembly viral genome packaging	host cellular component cellular anatomical structure host cell other organism part viral capsid virion component host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle
J [auth M]	Capsid vertex component 1	-	-	-
H [auth g], I [auth m]	Triplex capsid protein 1	DNA binding binding nucleic acid binding	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle
D [auth H], E [auth P]	Large tegument protein deneddylase	cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host ubiquitin-like protein modification symbiont-mediated perturbation of host process modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle host cell cytoplasm virion component viral tegument
B [auth h], C [auth I], F [auth n], G [auth o]	Triplex capsid protein 2	structural molecule activity	virion assembly viral process viral capsid assembly viral life cycle	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle
A [auth x], M [auth 1]	ORFL92C_UL32	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], Y, Z	IPR000912	Herpesvirus major capsid protein	Family
T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], T [auth a], U [auth A], V [auth B], W [auth C], X [auth D], Y, Z	IPR023233	Herpesvirus major capsid protein, upper domain superfamily	Homologous Superfamily
N [auth Q], O [auth R], P [auth S], Q [auth T], R [auth i], N [auth Q], O [auth R], P [auth S], Q [auth T], R [auth i], S [auth j]	IPR031385	Small capsid protein, Herpesviridae	Family
K [auth N], L [auth O]	IPR002493	Capsid vertex component 2	Family
H [auth g], I [auth m]	IPR004999	Herpesvirus capsid shell protein 1	Family
D [auth H], E [auth P]	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
D [auth H], E [auth P]	IPR006928	Herpesvirus large tegument protein, USP domain	Domain
D [auth H], E [auth P]	IPR034702	Large tegument protein deneddylase	Family
B [auth h], C [auth I], F [auth n], G [auth o]	IPR002690	Herpesvirus capsid protein 2	Family