7E38 | pdb_00007e38

Crystal structure of deoxypodophyllotoxin synthase from Sinopodophyllum hexandrum in complex with yatein and succinate

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIon_trans, Ion_trans_2e7e38B1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Ion_trans, Ion_trans_2ECOD (develop294)
AIon_trans, Ion_trans_2e7e38A1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Ion_trans, Ion_trans_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.330 Mainly Beta Sandwich Jelly Rolls B-lactam Antibiotic, Isopenicillin N SynthaseCATH (utative)
A2.60.120.330 Mainly Beta Sandwich Jelly Rolls B-lactam Antibiotic, Isopenicillin N SynthaseCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Deoxypodophyllotoxin synthase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050231Iron_ascorbate_oxido_reductaseUnknown
A, B
IPR026992Non-haem dioxygenase, N-terminal domainDomain
A, B
IPR005123Oxoglutarate/iron-dependent dioxygenase domainDomain
A, B
IPR027443Isopenicillin N synthase-like superfamilyHomologous Superfamily
A, B
IPR044861Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domainDomain