7DDE | pdb_00007dde

Cryo-EM structure of the Ape4 and Nbr1 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth X]HATPase_ce7ddeX1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
K [auth V]HATPase_ce7ddeV1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
J [auth S]HATPase_ce7ddeS1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
I [auth Q]HATPase_ce7ddeQ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
H [auth O]HATPase_ce7ddeO1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
G [auth M]HATPase_ce7ddeM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
F [auth K]HATPase_ce7ddeK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
E [auth I]HATPase_ce7ddeI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
D [auth G]HATPase_ce7ddeG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
C [auth E]HATPase_ce7ddeE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
B [auth C]HATPase_ce7ddeC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: HATPase_cECOD (v294.1)
Aadh_short_C2e7ddeA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: adh_short_C2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023358Peptidase M18, domain 2Homologous Superfamily
IPR001948Peptidase M18Family
IPR006061Solute-binding family 1, conserved siteConserved Site
IPR006060Maltose/Cyclodextrin ABC transporter, substrate-binding proteinFamily
IPR006059Bacterial-type extracellular solute-binding proteinFamily
IPR043145Zinc finger, ZZ-type superfamilyHomologous Superfamily
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR000433Zinc finger, ZZ-typeDomain
IPR032350Nbr1, FW domainDomain