7D3M | pdb_00007d3m

FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY R50

External Resource: Annotation

Domain Annotation: ECOD Classification
SAbDab Antibody Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth L]	XRCC4	e7d3mL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: XRCC4	ECOD (v294.1)
E [auth H]	dCMP_cyt_deam_1	e7d3mH01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: dCMP_cyt_deam_1	ECOD (v294.1)
C [auth 3]	V-set	e7d3m31	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: V-set	ECOD (v294.1)
B [auth 2]	V-set	e7d3m21	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: V-set	ECOD (v294.1)
A [auth 1]	V-set	e7d3m11	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: V-set	ECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
F [auth L]	Light Chain	IGLV1	Lambda	o/tibet/99 vp1 \| o/tibet/99 vp3	SAbDab (2026-03-27)
E [auth H]	Heavy Chain	IGHV1	-	o/tibet/99 vp1 \| o/tibet/99 vp3	SAbDab (2026-03-27)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth L]	R50 VL	-	-	-
E [auth H]	R50 VH	-	-	-
D [auth 4]	O/TIBET/99 VP4	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid
C [auth 3]	O/TIBET/99 VP3	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid
B [auth 2]	O/TIBET/99 VP2	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component cellular anatomical structure host cell other organism part viral capsid virion component
A [auth 1]	O/TIBET/99 VP1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component cellular anatomical structure host cell other organism part viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth 4]	IPR029053	Viral coat protein subunit	Homologous Superfamily
D [auth 4]	IPR004080	Foot-and-mouth disease virus VP1 coat	Domain
D [auth 4]	IPR001676	Picornavirus capsid	Domain
D [auth 4]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
D [auth 4]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily
C [auth 3]	IPR029053	Viral coat protein subunit	Homologous Superfamily
C [auth 3]	IPR004080	Foot-and-mouth disease virus VP1 coat	Domain
C [auth 3]	IPR001676	Picornavirus capsid	Domain
C [auth 3]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
C [auth 3]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily
B [auth 2]	IPR029053	Viral coat protein subunit	Homologous Superfamily
B [auth 2]	IPR001676	Picornavirus capsid	Domain
B [auth 2]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
A [auth 1]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A [auth 1]	IPR004080	Foot-and-mouth disease virus VP1 coat	Domain
A [auth 1]	IPR001676	Picornavirus capsid	Domain
A [auth 1]	IPR033703	Picornavirus/Calicivirus coat protein	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.