Crystal structure of multidrug efflux transporter OqxB from Klebsiella pneumoniae
External Resource: Annotation
- Domain Annotation: ECOD Classification
- AMR Gene: CARD Annotation
- AMR Gene Family: CARD Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Polycystin_dom | e7cz9B1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
| D | Polycystin_dom | e7cz9D1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
| F | Polycystin_dom | e7cz9F1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
| E | Polycystin_dom | e7cz9E1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
| C | Polycystin_dom | e7cz9C1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
| A | Polycystin_dom | e7cz9A1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Polycystin_dom | ECOD (v294.1) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3003923 | oqxB | RND efflux pump conferring resistance to fluoroquinolone. | CARD (4.0.1) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:0010004 | resistance-nodulation-cell division (RND) antibiotic efflux pump | fluoroquinolone antibiotic, glycylcycline, tetracycline antibiotic, diaminopyrimidine antibiotic, nitrofuran antibiotic | antibiotic efflux | CARD (4.0.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Efflux pump membrane transporter |
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Resistance-nodulation-cell division | Heavy metal efflux family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Multi-Drug Efflux Transporters | OqxB bacterial multi-drug efflux transporter |














