7CXO | pdb_00007cxo

Crystal structure of Arabinose isomerase from hybrid AI10


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARVT_thumbe7cxoA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: RVT_thumbECOD (v294.1)
BABC2_membranee7cxoB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: ABC2_membraneECOD (v294.1)
CRVT_thumbe7cxoC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: RVT_thumbECOD (v294.1)
DRVT_thumbe7cxoD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: RVT_thumbECOD (v294.1)
ERVT_thumbe7cxoE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: RVT_thumbECOD (v294.1)
FRVT_thumbe7cxoF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: RVT_thumbECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF11762L-arabinose isomerase C-terminal domain (Arabinose_Iso_C)L-arabinose isomerase C-terminal domainThis is a family of L-arabinose isomerases, AraA, EC:5.3.1.4. These enzymes catalyse the reaction: L-arabinose <=> L-ribulose. This reaction is the first step in the pathway of L-arabinose utilisation as a carbon source after entering the cell L-arab ...This is a family of L-arabinose isomerases, AraA, EC:5.3.1.4. These enzymes catalyse the reaction: L-arabinose <=> L-ribulose. This reaction is the first step in the pathway of L-arabinose utilisation as a carbon source after entering the cell L-arabinose is converted into L-ribulose by the L-arabinose isomerases enzyme [1]. This is a C-terminal non catalytic domain.
Domain
A, B, C, D, E
PF24856L-arabinose isomerase central domain (AraA_central)L-arabinose isomerase central domainThis entry represents a domain found central in L-arabinose isomerases, AraA, EC:5.3.1.4. These enzymes catalyse the reaction: L-arabinose <=> L-ribulose. This reaction is the first step in the pathway of L-arabinose utilisation as a carbon source af ...This entry represents a domain found central in L-arabinose isomerases, AraA, EC:5.3.1.4. These enzymes catalyse the reaction: L-arabinose <=> L-ribulose. This reaction is the first step in the pathway of L-arabinose utilisation as a carbon source after entering the cell L-arabinose is converted into L-ribulose by the L-arabinose isomerases enzyme [1]. The domain represented by this entry is composed of a central parallel beta-sheet packed with alpha-helices on both sides and with topology similar to the topology of the N-terminal domain [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
L-arabinose isomerase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR009015L-fucose isomerase, N-terminal/central domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003762L-arabinose isomeraseFamily
A, B, C, D, E
IPR055390L-arabinose isomerase, central domainDomain
A, B, C, D, E
IPR038583L-arabinose isomerase, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR055389L-arabinose isomerase, N-terminal domainDomain
A, B, C, D, E
IPR024664L-arabinose isomerase, C-terminalDomain
A, B, C, D, E
IPR004216L-fucose/L-arabinose isomerase, C-terminalHomologous Superfamily
A, B, C, D, E
IPR009015L-fucose isomerase, N-terminal/central domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003762L-arabinose isomeraseFamily
A, B, C, D, E
IPR055390L-arabinose isomerase, central domainDomain
A, B, C, D, E
IPR038583L-arabinose isomerase, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR055389L-arabinose isomerase, N-terminal domainDomain
A, B, C, D, E
IPR024664L-arabinose isomerase, C-terminalDomain
A, B, C, D, E
IPR004216L-fucose/L-arabinose isomerase, C-terminalHomologous Superfamily
A, B, C, D, E
IPR009015L-fucose isomerase, N-terminal/central domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003762L-arabinose isomeraseFamily
A, B, C, D, E
IPR055390L-arabinose isomerase, central domainDomain
A, B, C, D, E
IPR038583L-arabinose isomerase, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR055389L-arabinose isomerase, N-terminal domainDomain
A, B, C, D, E
IPR024664L-arabinose isomerase, C-terminalDomain
A, B, C, D, E
IPR004216L-fucose/L-arabinose isomerase, C-terminalHomologous Superfamily