Structure of DotL(656-783)-IcmS-IcmW-LvgA-VpdB(461-590) derived from Legionella pneumophila
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | C1-set | e7bwkG1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: C1-set | ECOD (v294.1) |
| B | C1-set | e7bwkB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: C1-set | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF23130 | IcmW (IcmW) | IcmW | - | Family | |
| PF12608 | Type IVb secretion, IcmS, effector-recruitment (T4bSS_IcmS) | Type IVb secretion, IcmS, effector-recruitment | This is a family of Gram-negative bacterial proteins involved in the Dot/Icm type IVb transport system. Members are small acidic cytoplasmic proteins required for Dot/Icm-dependent activities. Binary complexes of IcmW-IcmS and of IcmS-LvgA have been ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| PNPLA domain-containing protein | - | |||
| Hypothetical virulence protein | - | |||
| IcmW | - | |||
| IcmS | - | |||
| IcmO (DotL) | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR016035 | Acyl transferase/acyl hydrolase/lysophospholipase | Homologous Superfamily | |
| IPR002641 | Patatin-like phospholipase domain | Domain | |
| IPR052580 | Probable Lipid Hydrolase | Family | |
| IPR049919 | Type 4 adapter protein IcmW | Family | |
| IPR057079 | Type 4 adapter protein IcmW-like | Family | |
| IPR022250 | Type IVb secretion, IcmS, effector-recruitment | Family | |
| IPR051162 | T4SS_component | Unknown | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
| IPR032689 | TraD/TraG, TraM recognition site | Domain |














