7BC5 | pdb_00007bc5

Cryo-EM structure of ACP domain from Pichia pastoris fatty acid synthase (FAS)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CoA_binding_2	e7bc5A1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: CoA_binding_2	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF18325	Fatty acid synthase subunit alpha Acyl carrier domain (Fas_alpha_ACP)	Fatty acid synthase subunit alpha Acyl carrier domain	This is the acyl carrier domain (ACP) found in fatty acid synthase subunit alpha (FAS2) EC:2.3.1.86 .The fungal type I fatty acid synthase (FAS) is a 2.6 MDa multienzyme complex, catalyzing all necessary steps for the synthesis of long acyl chains. T ...	This is the acyl carrier domain (ACP) found in fatty acid synthase subunit alpha (FAS2) EC:2.3.1.86 .The fungal type I fatty acid synthase (FAS) is a 2.6 MDa multienzyme complex, catalyzing all necessary steps for the synthesis of long acyl chains. To be catalytically competent, the FAS must be activated by a posttranslational modification of the central acyl carrier domain (ACP) by an intrinsic phosphopantetheine transferase (PPT) [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Fatty acid synthase subunit alpha	holo-[acyl-carrier-protein] synthase activity transferase activity catalytic activity phosphotransferase activity, for other substituted phosphate groups transferase activity, transferring phosphorus-containing groups 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors acyltransferase activity 3-oxoacyl-[acyl-carrier-protein] synthase activity acyltransferase activity, transferring groups other than amino-acyl groups cation binding magnesium ion binding holo-[acyl-carrier-protein] synthase activity transferase activity catalytic activity phosphotransferase activity, for other substituted phosphate groups transferase activity, transferring phosphorus-containing groups 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors acyltransferase activity 3-oxoacyl-[acyl-carrier-protein] synthase activity acyltransferase activity, transferring groups other than amino-acyl groups cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding fatty-acyl-CoA synthase activity C-acyltransferase activity fatty acid synthase activity	fatty acid metabolic process long-chain fatty acid metabolic process palmitic acid biosynthetic process monocarboxylic acid biosynthetic process oxoacid metabolic process small molecule biosynthetic process long-chain fatty acid biosynthetic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid metabolic process organic acid biosynthetic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process fatty acid metabolic process long-chain fatty acid metabolic process palmitic acid biosynthetic process monocarboxylic acid biosynthetic process oxoacid metabolic process small molecule biosynthetic process long-chain fatty acid biosynthetic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid metabolic process organic acid biosynthetic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process lipid metabolic process membrane organization mitotic nuclear membrane biogenesis mitotic nuclear division organelle fission membrane biogenesis mitotic cell cycle nuclear membrane organization cellular component organization cellular component biogenesis nuclear division organelle organization nuclear membrane biogenesis nucleus organization mitotic cell cycle process nuclear envelope organization cellular component organization or biogenesis cell cycle endomembrane system organization cell cycle process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex fatty acid synthase complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	Homologous Superfamily
A	IPR002582	Holo-[acyl carrier protein] synthase	Family
A	IPR040899	Fatty acid synthase subunit alpha, acyl carrier domain	Domain
A	IPR014030	Beta-ketoacyl synthase-like, N-terminal domain	Domain
A	IPR037143	4'-phosphopantetheinyl transferase domain superfamily	Homologous Superfamily
A	IPR020841	Polyketide synthase, beta-ketoacyl synthase domain	Domain
A	IPR014031	Beta-ketoacyl synthase, C-terminal domain	Domain
A	IPR009081	Phosphopantetheine binding ACP domain	Domain
A	IPR041550	Fatty acid synthase type I, helical	Domain
A	IPR026025	Fatty acid synthase alpha subunit, yeast	Family
A	IPR008278	4'-phosphopantetheinyl transferase domain	Domain
A	IPR050830	Fungal fatty acid synthase	Family
A	IPR016039	Thiolase-like	Homologous Superfamily
A	IPR047224	Fatty acid synthase subunit alpha-like, C-terminal	Domain
A	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A	IPR018201	Beta-ketoacyl synthase, active site	Active Site
A	IPR004568	Phosphopantetheine-protein transferase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.