7B8V | pdb_00007b8v

Circular permutant of ribosomal protein S6, P54-55

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth V]	DUF1870	e7b8vV1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
W [auth R]	DUF1870	e7b8vR1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
V [auth Q]	DUF1870	e7b8vQ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
U [auth P]	DUF1870	e7b8vP1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
T [auth O]	DUF1870	e7b8vO1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
S [auth N]	DUF1870	e7b8vN1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
R [auth M]	DUF1870	e7b8vM1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
Q [auth L]	DUF1870	e7b8vL1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
P [auth K]	DUF1870	e7b8vK1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
O [auth J]	DUF1870	e7b8vJ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
N [auth I]	DUF1870	e7b8vI1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
M [auth H]	DUF1870	e7b8vH1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
L [auth G]	DUF1870	e7b8vG1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
K [auth F]	DUF1870	e7b8vF1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
J [auth E]	DUF1870	e7b8vE1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
I [auth D]	DUF1870	e7b8vD1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
H [auth C]	DUF1870	e7b8vC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
G [auth B]	DUF1870	e7b8vB1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
F [auth U]	DUF1870	e7b8vU1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
E [auth X]	DUF1870	e7b8vX1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
D [auth W]	DUF1870	e7b8vW1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
C [auth T]	DUF1870	e7b8vT1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
B [auth S]	DUF1870	e7b8vS1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: DUF1870	ECOD (develop294)
A	Ion_trans	e7b8vA1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ion_trans	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
X [auth V]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
W [auth R]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
V [auth Q]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
U [auth P]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
T [auth O]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
S [auth N]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
R [auth M]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
Q [auth L]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
P [auth K]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
O [auth J]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
N [auth I]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
M [auth H]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
L [auth G]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
K [auth F]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
J [auth E]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
I [auth D]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
H [auth C]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
G [auth B]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
F [auth U]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
E [auth X]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
D [auth W]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
C [auth T]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
B [auth S]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)
A	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	30S ribosomal protein S6	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	IPR020815	Small ribosomal subunit protein bS6, conserved site	Conserved Site
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	IPR000529	Small ribosomal subunit protein bS6	Family
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	IPR020814	Small ribosomal subunit protein bS6, plastid/chloroplast	Family
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
A, B [auth S], C [auth T], D [auth W], E [auth X], A, B [auth S], C [auth T], D [auth W], E [auth X], F [auth U], G [auth B], H [auth C], I [auth D], J [auth E], K [auth F], L [auth G], M [auth H], N [auth I], O [auth J], P [auth K], Q [auth L], R [auth M], S [auth N], T [auth O], U [auth P], V [auth Q], W [auth R], X [auth V]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily