Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth C]SCOP2B SuperfamilyVEFS box-like8090819 3002459 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyCore histone-like8041272 3001387 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyCore histone-like8041272 3001387 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyCore histone-like8042439 3001387 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyCore histone-like8042439 3001387 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyCore histone-like8041278 3001387 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyCore histone-like8041278 3001387 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyCore histone-like8041279 3001387 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyCore histone-like8041279 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00856e7at8A5 A: beta barrelsX: beta-clipH: SET domain-like (From Topology)T: SET domain-likeF: PF00856ECOD (1.6)
AF_UNCLASSIFIEDe7at8A3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe7at8A1 A: few secondary structure elementsX: Zn3Cys9 preSET domain-related (From Topology)H: Zn3Cys9 preSET domain-related (From Topology)T: Zn3Cys9 preSET domain-relatedF: F_UNCLASSIFIEDECOD (1.6)
APF18264e7at8A2 A: few secondary structure elementsX: Zn3Cys9 preSET domain-related (From Topology)H: Zn3Cys9 preSET domain-related (From Topology)T: Zn3Cys9 preSET domain-relatedF: PF18264ECOD (1.6)
APF21358e7at8A4 A: few secondary structure elementsX: Ezh2 MCSS domain (From Topology)H: Ezh2 MCSS domain (From Topology)T: Ezh2 MCSS domainF: PF21358ECOD (1.6)
B [auth C]PF09733e7at8C1 A: alpha arraysX: lambda integrase-N-likeH: VEFS domain (From Topology)T: VEFS domainF: PF09733ECOD (1.6)
C [auth D]PF00125e7at8D1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
G [auth H]PF00125e7at8H1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
D [auth E]PF15511e7at8E1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
H [auth I]PF15511e7at8I1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF15511ECOD (1.6)
E [auth F]PF00125,PF16211e7at8F1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
I [auth J]PF00125,PF16211e7at8J1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125,PF16211ECOD (1.6)
F [auth G]PF00125e7at8G1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)
J [auth K]PF00125e7at8K1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: PF00125ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18264CXC domain (preSET_CXC)CXC domainThis domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain.Domain
PF00856SET domain (SET)SET domain- Family
B [auth C]PF09733VEFS-Box of polycomb protein (VEFS-Box)VEFS-Box of polycomb protein- Family
C [auth D],
G [auth H]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
D [auth E],
H [auth I]
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
E [auth F],
I [auth J]
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
E [auth F],
I [auth J]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
F [auth G],
J [auth K]
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Isoform 2 of Histone-lysine N-methyltransferase EZH2,Isoform 2 of Histone-lysine N-methyltransferase EZH2,Histone-lysine N-methyltransferase EZH2,Isoform 2 of Histone-lysine N-methyltransferase EZH2,Isoform 2 of Histone-lysine N-methyltransferase EZH2
K [auth T]Widom601 DNA plus linker---
B [auth C]Polycomb protein SUZ12
C [auth D],
G [auth H]
Histone H3.2 -
D [auth E],
H [auth I]
Histone H4 -
E [auth F],
I [auth J]
Histone H2A -
F [auth G],
J [auth K]
Histone H2B 1.1 -
L [auth U]Widom601 DNA plus linker---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR048358EZH1/2, MCSS domainDomain
IPR041343Polycomb repressive complex 2 subunit EZH1/EZH2, tri-helical domainDomain
IPR046341SET domain superfamilyHomologous Superfamily
IPR001214SET domainDomain
IPR045318Histone-lysine N-methyltransferase EZH1/2-likeFamily
IPR033467Tesmin/TSO1-like CXC domainDomain
IPR044439EZH2, SET domainDomain
IPR026489CXC domainDomain
IPR041355Pre-SET CXC domainDomain
IPR001005SANT/Myb domainDomain
IPR021654Histone-lysine N-methyltransferase EZH1/EZH2Family
B [auth C]IPR019135Polycomb protein, VEFS-BoxDomain
C [auth D],
G [auth H]
IPR009072Histone-foldHomologous Superfamily
C [auth D],
G [auth H]
IPR007125Histone H2A/H2B/H3Domain
C [auth D],
G [auth H]
IPR000164Histone H3/CENP-AFamily
D [auth E],
H [auth I]
IPR009072Histone-foldHomologous Superfamily
D [auth E],
H [auth I]
IPR001951Histone H4Family
D [auth E],
H [auth I]
IPR035425CENP-T/Histone H4, histone foldDomain
D [auth E],
H [auth I]
IPR019809Histone H4, conserved siteConserved Site
D [auth E],
H [auth I]
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
E [auth F],
I [auth J]
IPR009072Histone-foldHomologous Superfamily
E [auth F],
I [auth J]
IPR007125Histone H2A/H2B/H3Domain
E [auth F],
I [auth J]
IPR002119Histone H2AFamily
E [auth F],
I [auth J]
IPR032454Histone H2A, C-terminal domainDomain
E [auth F],
I [auth J]
IPR032458Histone H2A conserved siteConserved Site
F [auth G],
J [auth K]
IPR009072Histone-foldHomologous Superfamily
F [auth G],
J [auth K]
IPR007125Histone H2A/H2B/H3Domain
F [auth G],
J [auth K]
IPR000558Histone H2BFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ15910
B [auth C]PharosQ15022