7AR9 | pdb_00007ar9

Cryo-EM structure of Polytomella Complex-I (membrane arm)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth T]Dynamin_N,Dynamin_Me7ar9T1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
H [auth O]Dynamin_N,Dynamin_Me7ar9O1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
G [auth N]Dynamin_N,Dynamin_Me7ar9N1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
F [auth M]Dynamin_N,Dynamin_Me7ar9M1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
E [auth L]Dynamin_N,Dynamin_Me7ar9L1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
D [auth K]Dynamin_N,Dynamin_Me7ar9K1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
IA [auth z]NDUFA12e7ar9z01 A: alpha bundlesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: NDUFA12ECOD (develop294)
HA [auth y]NDUFA12e7ar9y01 A: alpha bundlesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: NDUFA12ECOD (develop294)
GA [auth x]NDUFA12e7ar9x01 A: alpha bundlesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: NDUFA12ECOD (develop294)
C [auth J]Dynamin_N,Dynamin_Me7ar9J1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
Z [auth n]NDUFA12e7ar9n01 A: alpha bundlesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: NDUFA12ECOD (develop294)
B [auth H]Dynamin_N,Dynamin_Me7ar9H1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
Q [auth e]Dynamin_N,Dynamin_Me7ar9e1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
M [auth a]Dynamin_N,Dynamin_Me7ar9a1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
L [auth Z]Dynamin_N,Dynamin_Me7ar9Z1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
J [auth X]Dynamin_N,Dynamin_Me7ar9X1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Dynamin_N,Dynamin_MECOD (develop294)
ANDUFA12e7ar9A01 A: alpha bundlesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: NDUFA12ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
IA [auth z]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
HA [auth y]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth T]SDAP1---
H [auth O]C1-FDX---
G [auth N]ND2
F [auth M]ND4
E [auth L]ND5
D [auth K]ND4L---
IA [auth z]CA3---
HA [auth y]CA2- -
GA [auth x]CAL- -
FA [auth w]unknown---
EA [auth u]unknown---
DA [auth t]NUOP8- - -
C [auth J]ND6 -
CA [auth s]NUOP7- - -
BA [auth p]PDSW---
AA [auth o]B18---
Z [auth n]B22-
Y [auth m]B15- - -
X [auth l]ASHI- - -
W [auth k]B12---
V [auth j]AGGG---
U [auth i]NUOP5---
T [auth h]NUOP4---
B [auth H]ND1
S [auth g]ESSS---
R [auth f]MNLL---
Q [auth e]15 kDa---
P [auth d]B14.5b---
O [auth c]KFYI---
N [auth b]B9---
M [auth a]MWFE---
L [auth Z]B16.6- -
K [auth Y]B14.7- - -
J [auth X]PGIV-
ND3---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth N]IPR050175Complex I Subunit 2Family
G [auth N]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
F [auth M]IPR003918NADH:ubiquinone oxidoreductaseFamily
F [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
E [auth L]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
E [auth L]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
E [auth L]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
HA [auth y]IPR047324Gamma carbonic anhydrase-likeFamily
HA [auth y]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
HA [auth y]IPR050484Transferase Hexapeptide/Carbonic AnhydraseFamily
HA [auth y]IPR001451Hexapeptide repeatRepeat
GA [auth x]IPR047324Gamma carbonic anhydrase-likeFamily
GA [auth x]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
GA [auth x]IPR050484Transferase Hexapeptide/Carbonic AnhydraseFamily
GA [auth x]IPR001451Hexapeptide repeatRepeat
C [auth J]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
C [auth J]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
Z [auth n]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
Z [auth n]IPR008011Complex 1 LYR protein domainDomain
Z [auth n]IPR045292NDUFB9, LYR domainDomain
B [auth H]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
B [auth H]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
L [auth Z]IPR009346GRIM-19Family
J [auth X]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family