7AOY | pdb_00007aoy

Helical arrangement of Bunyamwera virus nucleocapsid protein within a native ribonucleoprotein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	PepMV Coat protein-like	8089912	3002401	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	Ribosomal_L19	e7aoyI1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
H	Ribosomal_L19	e7aoyH1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
G	Ribosomal_L19	e7aoyG1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
F	Ribosomal_L19	e7aoyF1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
E	Ribosomal_L19	e7aoyE1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
D	Ribosomal_L19	e7aoyD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
C	Ribosomal_L19	e7aoyC1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
B [auth A]	Ribosomal_L19	e7aoyA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)
A [auth B]	Ribosomal_L19	e7aoyB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ribosomal_L19	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A], C, D, E, A [auth B], B [auth A], C, D, E, F, G, H, I	PF00952	Bunyavirus nucleocapsid (N) protein (Bunya_nucleocap)	Bunyavirus nucleocapsid (N) protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A], C, D, E, A [auth B], B [auth A], C, D, E, F, G, H, I	Nucleoprotein	RNA binding binding nucleic acid binding	symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A], C, D, E, A [auth B], B [auth A], C, D, E, F, G, H, I	IPR043011	Bunyavirus nucleocapsid (N) , C-terminal domain	Homologous Superfamily
A [auth B], B [auth A], C, D, E, A [auth B], B [auth A], C, D, E, F, G, H, I	IPR043012	Bunyavirus nucleocapsid (N) , N-terminal domain	Homologous Superfamily
A [auth B], B [auth A], C, D, E, A [auth B], B [auth A], C, D, E, F, G, H, I	IPR001784	Bunyavirus nucleocapsid (N) protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.