7A4P | pdb_00007a4p

Structure of small high-light grown Chlorella ohadii photosystem I


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8104043 3000824 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8103805 3000813 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins 8103817 3000325 SCOP2B (2022-06-29)
DSCOP2 FamilyPhotosystem I subunit PsaD 8103794 4003498 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyPhotosystem I subunit PsaD 8103795 3000951 SCOP2 (2022-06-29)
CSCOP2 Family7-Fe ferredoxin 8104038 4001227 SCOP2 (2022-06-29)
CSCOP2 Superfamily4Fe-4S ferredoxins 8104039 3000020 SCOP2 (2022-06-29)
BSCOP2 FamilyPhotosystem I subunits PsaA/PsaB 8104040 4002118 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB 8104041 3000850 SCOP2 (2022-06-29)
T [auth 8]SCOP2 FamilyChlorophyll a-b binding protein 8103812 4001763 SCOP2 (2022-06-29)
T [auth 8]SCOP2 SuperfamilyChlorophyll a-b binding protein 8103813 3000343 SCOP2 (2022-06-29)
S [auth 7]SCOP2 FamilyChlorophyll a-b binding protein 8103808 4001763 SCOP2 (2022-06-29)
S [auth 7]SCOP2 SuperfamilyChlorophyll a-b binding protein 8103809 3000343 SCOP2 (2022-06-29)
R [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein 8103801 3000343 SCOP2B (2022-06-29)
Q [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein 8103815 3000343 SCOP2B (2022-06-29)
P [auth 4]SCOP2 FamilyChlorophyll a-b binding protein 8103806 4001763 SCOP2 (2022-06-29)
P [auth 4]SCOP2 SuperfamilyChlorophyll a-b binding protein 8103807 3000343 SCOP2 (2022-06-29)
N [auth a]SCOP2 FamilyChlorophyll a-b binding protein 8103810 4001763 SCOP2 (2022-06-29)
N [auth a]SCOP2 SuperfamilyChlorophyll a-b binding protein 8103811 3000343 SCOP2 (2022-06-29)
M [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8103811 3000343 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyPhotosystem I reaction center subunit XI, PsaL 8103793 3000870 SCOP2B (2022-06-29)
K [auth I]SCOP2 FamilySubunit VIII of photosystem I reaction centre, PsaI 8104036 4002098 SCOP2 (2022-06-29)
K [auth I]SCOP2 SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8104037 3000819 SCOP2 (2022-06-29)
ASCOP2 FamilyPhotosystem I subunits PsaA/PsaB 8104044 4002118 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB 8104045 3000850 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth K]Abhydrolase_1e7a4pK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
H [auth J]Abhydrolase_1e7a4pJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
GAbhydrolase_1e7a4pG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
FAbhydrolase_1e7a4pF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
EAbhydrolase_1e7a4pE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
DAbhydrolase_1e7a4pD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
CAbhydrolase_1e7a4pC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
BAbhydrolase_1e7a4pB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
T [auth 8]Abhydrolase_1e7a4p81 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
S [auth 7]Abhydrolase_1e7a4p71 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
R [auth 6]Fer4+Fer4_7e7a4p61 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer4+Fer4_7ECOD (v294.1)
Q [auth 5]Fer4+Fer4_7e7a4p51 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Fer4+Fer4_7ECOD (v294.1)
P [auth 4]Abhydrolase_1e7a4p41 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
O [auth 3]Abhydrolase_1e7a4p31 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
N [auth a]Abhydrolase_1e7a4pa1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
M [auth 1]Abhydrolase_1e7a4p11 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
LAbhydrolase_1e7a4pL1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
K [auth I]Abhydrolase_1e7a4pI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
J [auth M]Abhydrolase_1e7a4pM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)
AAbhydrolase_1e7a4pA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Abhydrolase_1ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth K]PF01241Photosystem I psaG / psaK (PSI_PSAK)Photosystem I psaG / psaK- Family
PF01241Photosystem I psaG / psaK (PSI_PSAK)Photosystem I psaG / psaK- Family
PF02507Photosystem I reaction centre subunit III (PSI_PsaF)Photosystem I reaction centre subunit III- Family
PF02427Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)Photosystem I reaction centre subunit IV / PsaEPsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. Domain
PF02531PsaD (PsaD)PsaD- Family
T [auth 8]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
S [auth 7]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
R [auth 6]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
Q [auth 5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
P [auth 4]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
O [auth 3]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
M [auth 1],
N [auth a]
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
PF02605Photosystem I reaction centre subunit XI (PsaL)Photosystem I reaction centre subunit XI- Family
PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth K]PSI-K-
H [auth J]Photosystem I reaction center subunit IX-
Photosystem I reaction center subunit chloroplastic-
PSI-F-
Photosystem I reaction center subunit IV-
Photosystem I reaction center subunit chloroplastic
Photosystem I iron-sulfur center
Photosystem I P700 chlorophyll a apoprotein A2
T [auth 8]Chlorophyll a-b binding protein, chloroplastic
S [auth 7]Chlorophyll a-b binding protein, chloroplastic
R [auth 6]Chlorophyll a-b binding protein, chloroplastic
Q [auth 5]Chlorophyll a-b binding protein, chloroplastic
P [auth 4]Chlorophyll a-b binding protein, chloroplastic
O [auth 3]Glutathione reductase
M [auth 1],
N [auth a]
Chlorophyll a-b binding protein, chloroplastic
PSI subunit V
K [auth I]Photosystem I reaction center subunit VIII-
J [auth M]Photosystem I reaction center subunit XII-
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth K]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
I [auth K]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
I [auth K]IPR000549Photosystem I reaction center subunit V/PsaKFamily
I [auth K]IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
H [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
H [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
IPR000549Photosystem I reaction center subunit V/PsaKFamily
IPR020966Aluminum-activated malate transporterFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
IPR021420Protein of unknown function DUF3067Family
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR050157Photosystem I iron-sulfur centerFamily
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
T [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
T [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
S [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
S [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
R [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
R [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
Q [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
Q [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
P [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
P [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 3]IPR004099Pyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomain
O [auth 3]IPR046952Glutathione reductase/thioredoxin reductase-likeFamily
O [auth 3]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 3]IPR016156FAD/NAD-linked reductase, dimerisation domain superfamilyHomologous Superfamily
O [auth 3]IPR036188FAD/NAD(P)-binding domain superfamilyHomologous Superfamily
O [auth 3]IPR001128Cytochrome P450Family
O [auth 3]IPR023753FAD/NAD(P)-binding domainDomain
O [auth 3]IPR012999Pyridine nucleotide-disulphide oxidoreductase, class I, active siteActive Site
O [auth 3]IPR036396Cytochrome P450 superfamilyHomologous Superfamily
M [auth 1],
N [auth a]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 1],
N [auth a]
IPR022796Chlorophyll A-B binding proteinFamily
IPR016181Acyl-CoA N-acyltransferaseHomologous Superfamily
IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
IPR022980Photosystem I, reaction centre subunit XIFamily
IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
IPR000182GNAT domainDomain
K [auth I]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
K [auth I]IPR001302Photosystem I reaction centre subunit VIIIFamily
J [auth M]IPR010010Photosystem I PsaM, reaction centreFamily
J [auth M]IPR037279Photosystem I PsaM, reaction centre superfamilyHomologous Superfamily
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage