Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| GA [auth g] | d6zv6g_ | All beta proteins | 7-bladed beta-propeller | WD40 repeat-like | WD40-repeat | Guanine nucleotide-binding protein subunit beta-2-like 1 (GNB2L1 or RACK1) | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth H] | RNA_pol_Rpb1_5 | e6zv6H1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| H [auth G] | RNA_pol_Rpb1_5 | e6zv6G1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| G [auth F] | RNA_pol_Rpb1_5 | e6zv6F1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| F [auth E] | RNA_pol_Rpb1_5 | e6zv6E1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| E [auth D] | RNA_pol_Rpb1_5 | e6zv6D1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| D [auth C] | RNA_pol_Rpb1_5 | e6zv6C1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| IA [auth h] | CoA_binding_2 | e6zv6h1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: CoA_binding_2 | ECOD (v295) |
| HA [auth T] | RNA_pol_Rpb1_5 | e6zv6T1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| GA [auth g] | RNA_pol_Rpb1_5 | e6zv6g1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| FA [auth f] | RNA_pol_Rpb1_5 | e6zv6f1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| EA [auth e] | RNA_pol_Rpb1_5 | e6zv6e1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| DA [auth d] | RNA_pol_Rpb1_5 | e6zv6d1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| C [auth B] | RNA_pol_Rpb1_5 | e6zv6B1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| CA [auth c] | RNA_pol_Rpb1_5 | e6zv6c1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| BA [auth b] | RNA_pol_Rpb1_5 | e6zv6b1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| AA [auth Z] | RNA_pol_Rpb1_5 | e6zv6Z1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| Z [auth Y] | RNA_pol_Rpb1_5 | e6zv6Y1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| Y [auth X] | RNA_pol_Rpb1_5 | e6zv6X1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| X [auth W] | RNA_pol_Rpb1_5 | e6zv6W1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| W [auth V] | RNA_pol_Rpb1_5 | e6zv6V1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| V [auth U] | RNA_pol_Rpb1_5 | e6zv6U1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| U [auth a] | CoA_binding_2 | e6zv6a1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: CoA_binding_2 | ECOD (v295) |
| T [auth S] | RNA_pol_Rpb1_5 | e6zv6S1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| B [auth A] | RNA_pol_Rpb1_5 | e6zv6A1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| S [auth R] | RNA_pol_Rpb1_5 | e6zv6R1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| R [auth Q] | RNA_pol_Rpb1_5 | e6zv6Q1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| Q [auth P] | RNA_pol_Rpb1_5 | e6zv6P1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| P [auth O] | RNA_pol_Rpb1_5 | e6zv6O1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| O [auth N] | RNA_pol_Rpb1_5 | e6zv6N1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| N [auth M] | RNA_pol_Rpb1_5 | e6zv6M1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| M [auth L] | RNA_pol_Rpb1_5 | e6zv6L1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| L [auth K] | RNA_pol_Rpb1_5 | e6zv6K1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| K [auth J] | RNA_pol_Rpb1_5 | e6zv6J1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
| J [auth I] | RNA_pol_Rpb1_5 | e6zv6I1 | A: alpha arrays | X: DNA methylase specificity domain | H: Bromodomain | T: Bromodomain | F: RNA_pol_Rpb1_5 | ECOD (v295) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| E [auth D] | 3.30.300.20 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| IA [auth h] | PHD | Parent Component: ASP :  AA0033 :  L-aspartic 4-phosphoric anhydride MOD:00042 |
| A [auth 2] | 6MZ | Parent Component: A :  AA0033 |
| A [auth 2] | UR3 | Parent Component: U :  AA0033 |














