Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth AAA]SCOP2B SuperfamilyVHL8041313 3000841 SCOP2B (2022-06-29)
B [auth BBB]SCOP2B SuperfamilyUbiquitin-like8038575 3000157 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AAA]PF01847e6zhcAAA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: PF01847ECOD (1.6)
A [auth AAA]PF17211e6zhcAAA2 A: alpha arraysX: SOCS box-like (From Topology)H: SOCS box-like (From Topology)T: SOCS box-likeF: PF17211ECOD (1.6)
B [auth BBB]PF00240e6zhcBBB1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF00240ECOD (1.6)
C [auth CCC]PF03931e6zhcCCC1 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF03931ECOD (1.6)
D [auth DDD]PF00452,PF02180e6zhcDDD1 A: alpha arraysX: Toxins' membrane translocation domainsH: Bcl-2 inhibitors of programmed cell death (From Topology)T: Bcl-2 inhibitors of programmed cell deathF: PF00452,PF02180ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AAA]PF17211VHL box domain (VHL_C)VHL box domainThis domain represents the short C-terminal alpha helical domain from the VHL protein [1].Domain
A [auth AAA]PF01847VHL beta domain (VHL)VHL beta domainVHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA.Domain
B [auth BBB]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
C [auth CCC]PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domain- Domain
D [auth DDD]PF02180Bcl-2 homology region 4 (BH4)Bcl-2 homology region 4- Family
D [auth DDD]PF00452Apoptosis regulator proteins, Bcl-2 family (Bcl-2)Apoptosis regulator proteins, Bcl-2 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AAA]von Hippel-Lindau disease tumor suppressor
B [auth BBB]Elongin-B
C [auth CCC]Elongin-C
D [auth DDD]Bcl-2-like protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AAA]IPR037139von Hippel-Lindau disease tumour suppressor, alpha domain superfamilyHomologous Superfamily
A [auth AAA]IPR022772von Hippel-Lindau disease tumour suppressor, beta/alpha domainDomain
A [auth AAA]IPR024053von Hippel-Lindau disease tumour suppressor, beta domainDomain
A [auth AAA]IPR024048von Hippel-Lindau disease tumour suppressor, alpha domainDomain
A [auth AAA]IPR036208VHL superfamilyHomologous Superfamily
A [auth AAA]IPR037140von Hippel-Lindau disease tumour suppressor, beta domain superfamilyHomologous Superfamily
B [auth BBB]IPR000626Ubiquitin-like domainDomain
B [auth BBB]IPR039049Elongin BFamily
B [auth BBB]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
C [auth CCC]IPR016073SKP1 component, POZ domainDomain
C [auth CCC]IPR001232S-phase kinase-associated protein 1-likeFamily
C [auth CCC]IPR039948Elongin-CFamily
C [auth CCC]IPR011333SKP1/BTB/POZ domain superfamilyHomologous Superfamily
D [auth DDD]IPR036834Bcl-2-like superfamilyHomologous Superfamily
D [auth DDD]IPR004725Apoptosis regulator, Bcl-2/ BclXFamily
D [auth DDD]IPR003093Apoptosis regulator, Bcl-2 protein, BH4Domain
D [auth DDD]IPR002475Bcl2-likeFamily
D [auth DDD]IPR020731Apoptosis regulator, Bcl-2, BH4 motif, conserved siteConserved Site
D [auth DDD]IPR013279Apoptosis regulator, Bcl-XFamily
D [auth DDD]IPR020728Apoptosis regulator, Bcl-2, BH3 motif, conserved siteConserved Site
D [auth DDD]IPR020726Apoptosis regulator, Bcl-2, BH2 motif, conserved siteConserved Site
D [auth DDD]IPR046371Bcl-2, Bcl-2 homology region 1-3Domain
D [auth DDD]IPR026298Bcl-2 familyFamily
D [auth DDD]IPR020717Apoptosis regulator, Bcl-2, BH1 motif, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth AAA]PharosP40337
B [auth BBB]PharosQ15370
C [auth CCC]PharosQ15369
D [auth DDD]PharosQ07817