6ZCL | pdb_00006zcl

Coxsackievirus B3 in complex with capsid binder compound 17


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De6zclD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: DctPF:ECOD (20:10:01)
Ce6zclC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: DctPF:ECOD (20:10:01)
Be6zclB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: DctPF:ECOD (20:10:01)
Ae6zclA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: DctPF:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
capsid protein VP4
capsid protein VP3
capsid protein VP2
capsid protein VP1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR059138Picornavirus capsid VP1Domain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR059138Picornavirus capsid VP1Domain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR059138Picornavirus capsid VP1Domain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR059138Picornavirus capsid VP1Domain
IPR002527Picornavirus 2B proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR001676Picornavirus capsidDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR000081Peptidase C3, picornavirus core protein 2ADomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
IPR003593AAA+ ATPase domainDomain
IPR003138Picornavirus coat protein VP4Family
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR014838Poliovirus 3A protein-likeDomain
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain