6ZB6 | pdb_00006zb6

Crystal structure of Lolium rigidum GSTF in complex with S-(p-nitrobenzyl) glutathione

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6zb6a2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
A	d6zb6a1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
A	d6zb6a3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
B [auth C]	d6zb6c2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
B [auth C]	d6zb6c1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
B [auth C]	d6zb6c3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
C [auth E]	d6zb6e2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
C [auth E]	d6zb6e1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
D [auth B]	d6zb6b2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
D [auth B]	d6zb6b1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
E [auth F]	d6zb6f2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
E [auth F]	d6zb6f1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
F [auth D]	d6zb6d2	All alpha proteins	GST C-terminal domain-like	GST C-terminal domain-like	Glutathione S-transferase (GST), C-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)
F [auth D]	d6zb6d1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Glutathione S-transferase (GST), N-terminal domain	automated matches	(Lolium rigidum ) [TaxId: 89674 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	WD40	e6zb6A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)
B [auth C]	WD40	e6zb6C1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)
C [auth E]	WD40	e6zb6E1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)
D [auth B]	WD40	e6zb6B1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)
E [auth F]	WD40	e6zb6F1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)
F [auth D]	WD40	e6zb6D1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: WD40	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
A	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)
B [auth C]	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
B [auth C]	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)
C [auth E]	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
C [auth E]	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)
D [auth B]	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
D [auth B]	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)
E [auth F]	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
E [auth F]	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)
F [auth D]	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (utative)
F [auth D]	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	Glutathione transferase	glutathione transferase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity modified amino acid binding binding ion binding oligopeptide binding anion binding glutathione binding sulfur compound binding small molecule binding	glutathione metabolic process modified amino acid metabolic process sulfur compound metabolic process metabolic process cellular process response to stimulus response to chemical response to stress response to herbicide response to toxic substance	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR004046	Glutathione S-transferase, C-terminal	Domain
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR010987	Glutathione S-transferase, C-terminal-like	Domain
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR036282	Glutathione S-transferase, C-terminal domain superfamily	Homologous Superfamily
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR034347	Glutathione S-transferases Phi, C-terminal	Domain
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR004045	Glutathione S-transferase, N-terminal	Domain
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B [auth C], C [auth E], D [auth B], E [auth F], A, B [auth C], C [auth E], D [auth B], E [auth F], F [auth D]	IPR040079	Glutathione transferase family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.