Crystal structure of PnrA from S. pneumoniae in complex with uridine
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth DDD] | Ribosomal_L36 | e6yabDDD1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L36 | ECOD (v294.1) |
| B [auth AAA] | Ribosomal_L36 | e6yabAAA1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L36 | ECOD (v294.1) |
| C [auth BBB] | Ribosomal_L36 | e6yabBBB1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L36 | ECOD (v294.1) |
| A [auth CCC] | Ribosomal_L36 | e6yabCCC1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Ribosomal_L36 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth DDD] | PF02608 | ABC transporter substrate-binding protein PnrA-like (Bmp) | ABC transporter substrate-binding protein PnrA-like | - | Family |
| B [auth AAA] | PF02608 | ABC transporter substrate-binding protein PnrA-like (Bmp) | ABC transporter substrate-binding protein PnrA-like | - | Family |
| A [auth CCC], C [auth BBB] | PF02608 | ABC transporter substrate-binding protein PnrA-like (Bmp) | ABC transporter substrate-binding protein PnrA-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| D [auth DDD] | Lipoprotein | - | - | |
| B [auth AAA] | Lipoprotein | - | - | |
| A [auth CCC], C [auth BBB] | Lipoprotein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| D [auth DDD] | IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
| D [auth DDD] | IPR050957 | BMP Lipoprotein | Family |
| D [auth DDD] | IPR003760 | ABC transporter substrate-binding protein PnrA-like | Domain |
| B [auth AAA] | IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
| B [auth AAA] | IPR050957 | BMP Lipoprotein | Family |
| B [auth AAA] | IPR003760 | ABC transporter substrate-binding protein PnrA-like | Domain |
| A [auth CCC], C [auth BBB] | IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
| A [auth CCC], C [auth BBB] | IPR050957 | BMP Lipoprotein | Family |
| A [auth CCC], C [auth BBB] | IPR003760 | ABC transporter substrate-binding protein PnrA-like | Domain |
