6Y6A | pdb_00006y6a

Structure of Finch Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
Z	d6y6az_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
Y	d6y6ay_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
X	d6y6ax_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
W	d6y6aw_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
V	d6y6av_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
U	d6y6au_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
T	d6y6at_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
S	d6y6as_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
R	d6y6ar_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
Q	d6y6aq_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
P	d6y6ap_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
O	d6y6ao_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
N	d6y6an_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
MA [auth m]	d6y6am_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
LA [auth l]	d6y6al_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
KA [auth k]	d6y6ak_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
J	d6y6aj_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
IA [auth i]	d6y6ai_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
H	d6y6ah_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
G	d6y6ag_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
F	d6y6af_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
EA [auth e]	d6y6ae_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
D	d6y6ad_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
C	d6y6ac_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
B	d6y6ab_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)
A	d6y6aa_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Group I dsDNA viruses	Papovaviridae-like VP	automated matches	(Finch polyomavirus ) [TaxId: 349564 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
NA [auth n]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
MA [auth m]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
LA [auth l]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
KA [auth k]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
JA [auth j]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
IA [auth i]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
HA [auth h]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
GA [auth g]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
FA [auth f]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
EA [auth e]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Group I dsDNA viruses	8100788	3000939	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	Bac_rhodopsin	e6y6aZ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
Y	Bac_rhodopsin	e6y6aY1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
X	Bac_rhodopsin	e6y6aX1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
W	Bac_rhodopsin	e6y6aW1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
V	Bac_rhodopsin	e6y6aV1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
U	Bac_rhodopsin	e6y6aU1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
T	Bac_rhodopsin	e6y6aT1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
S	Bac_rhodopsin	e6y6aS1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
R	Bac_rhodopsin	e6y6aR1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
Q	Bac_rhodopsin	e6y6aQ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
P	Bac_rhodopsin	e6y6aP1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
O	Bac_rhodopsin	e6y6aO1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
NA [auth n]	Bac_rhodopsin	e6y6an1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
N	Bac_rhodopsin	e6y6aN1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
MA [auth m]	Bac_rhodopsin	e6y6am1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
M	Bac_rhodopsin	e6y6aM1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
LA [auth l]	Bac_rhodopsin	e6y6al1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
L	Bac_rhodopsin	e6y6aL1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
KA [auth k]	Bac_rhodopsin	e6y6ak1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
K	Bac_rhodopsin	e6y6aK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
JA [auth j]	Bac_rhodopsin	e6y6aj1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
J	Bac_rhodopsin	e6y6aJ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
IA [auth i]	Bac_rhodopsin	e6y6ai1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
I	Bac_rhodopsin	e6y6aI1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
HA [auth h]	Bac_rhodopsin	e6y6ah1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
H	Bac_rhodopsin	e6y6aH1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
GA [auth g]	Bac_rhodopsin	e6y6ag1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
G	Bac_rhodopsin	e6y6aG1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
FA [auth f]	Bac_rhodopsin	e6y6af1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
F	Bac_rhodopsin	e6y6aF1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
EA [auth e]	Bac_rhodopsin	e6y6ae1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
E	Bac_rhodopsin	e6y6aE1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
DA [auth d]	Bac_rhodopsin	e6y6ad1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
D	Bac_rhodopsin	e6y6aD1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
CA [auth c]	Bac_rhodopsin	e6y6ac1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
C	Bac_rhodopsin	e6y6aC1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
BA [auth b]	Bac_rhodopsin	e6y6ab1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
B	Bac_rhodopsin	e6y6aB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
AA [auth a]	Bac_rhodopsin	e6y6aa1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)
A	Bac_rhodopsin	e6y6aA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: Bac_rhodopsin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
Z	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
Y	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
X	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
W	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
V	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
U	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
T	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
S	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
R	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
Q	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
P	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
O	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
NA [auth n]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
N	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
MA [auth m]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
M	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
LA [auth l]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
L	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
KA [auth k]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
K	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
JA [auth j]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
J	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
IA [auth i]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
I	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
HA [auth h]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
H	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
GA [auth g]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
G	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
FA [auth f]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
F	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
EA [auth e]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
E	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
DA [auth d]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
D	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
CA [auth c]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
C	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
BA [auth b]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
B	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
AA [auth a]	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)
A	2.60.175.10	Mainly Beta	Sandwich	Polyomavirus Vp1	Chain A	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, P, Q, R, S, T, U, V, W, X, Y, Z	Capsid protein VP1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell	viral capsid icosahedral viral capsid T=7 icosahedral viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR011222	Double-stranded DNA virus, group I, capsid	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR000662	Capsid protein VP1,Polyomavirus	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR036931	Polyomavirus capsid protein VP1 superfamily	Homologous Superfamily