6Y5X
Structure of apo New Jersey Polyomavirus VP1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
G | SCOP2 Family | papovaviridae-like vp | 8096007 | 4003485 | SCOP2 (2021-05-27) |
G | SCOP2 Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2 (2021-05-27) |
H | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
J | SCOP2B Superfamily | Group I dsDNA viruses | 8096008 | 3000939 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00718 | e6y5xA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
B | PF00718 | e6y5xB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
C | PF00718 | e6y5xC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
D | PF00718 | e6y5xD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
E | PF00718 | e6y5xE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
F | PF00718 | e6y5xF1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
G | PF00718 | e6y5xG1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
H | PF00718 | e6y5xH1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
I | PF00718 | e6y5xI1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
J | PF00718 | e6y5xJ1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
B | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
C | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
D | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
E | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
F | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
G | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
H | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
I | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
J | 2.60.175.10 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
VP1 | - |