6X3J | pdb_00006x3j

Crystal structure of streptogramin A acetyltransferase VatA from Staphylococcus aureus in complex with streptogramin analog F0224 (46)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
AMR Gene: CARD Annotation
AMR Gene Family: CARD Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6x3ja_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
B	d6x3jb_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
C	d6x3jc_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
D	d6x3jd_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
E	d6x3je_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
F	d6x3jf_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Galactoside acetyltransferase-like	automated matches	(Staphylococcus aureus ) [TaxId: 1280 ], (Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Baculo_p26	e6x3jA1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)
B	Baculo_p26	e6x3jB1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)
C	Baculo_p26	e6x3jC1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)
D	Baculo_p26	e6x3jD1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)
E	Baculo_p26	e6x3jE1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)
F	Baculo_p26	e6x3jF1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: N-terminal domain of poxin	T: N-terminal domain of poxin	F: Baculo_p26	ECOD (v294.1)

AMR Gene: CARD Annotation CARD Database Homepage

Chains	Accession	Short Name	Description	Provenance Source (Version)
A, B, C, D, E A, B, C, D, E, F	ARO:3002840	vatA	vatA is a plasmid-mediated acetyltransferase found in Staphylococcus aureus.	CARD (4.0.1)

AMR Gene Family: CARD Annotation CARD Database Homepage

Chains	Accession	Gene Family	Drug Class	Resistance Machanism	Provenance Source (Version)
A, B, C, D, E A, B, C, D, E, F	ARO:3000453	streptogramin vat acetyltransferase	streptogramin antibiotic, streptogramin A antibiotic	antibiotic inactivation	CARD (4.0.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Virginiamycin A acetyltransferase,VatA	acyltransferase activity transferase activity catalytic activity	response to stimulus response to chemical response to antibiotic	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR050179	Transferase hexapeptide repeat	Family
A, B, C, D, E A, B, C, D, E, F	IPR001451	Hexapeptide repeat	Repeat

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.