6WXW | pdb_00006wxw

crystal structure of apo Card1


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BBaculo_p26e6wxwB2 A: a/b three-layered sandwichesX: cradle loop barrelH: N-terminal domain of poxinT: N-terminal domain of poxinF: Baculo_p26ECOD (v294.1)
ACard1_endonuce6wxwA2 A: a/b three-layered sandwichesX: cradle loop barrelH: N-terminal domain of poxinT: N-terminal domain of poxinF: Card1_endonucECOD (v294.1)
ABaculo_p26e6wxwA3 A: a/b three-layered sandwichesX: cradle loop barrelH: N-terminal domain of poxinT: N-terminal domain of poxinF: Baculo_p26ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF23401Card1 hinge domain (HTH_Card1)Card1 hinge domainThis is the hinge domain found in a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a protein that is part ...This is the hinge domain found in a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a protein that is part of type III CRISPR-Cas immune response system. This protein consists of a CARF (CRISPR-associated Rossmann fold) domain at the N-terminal, an helical hinge domain and a C-terminal endonuclease domain (Pfam:PF09002) [1].
Domain
A, B
PF23400Card1 CARF domain (CARF_Card1)Card1 CARF domainThis is the CARF domain found at the N-terminal of a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a pro ...This is the CARF domain found at the N-terminal of a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a protein that is part of type III CRISPR-Cas immune response system. This protein consists of a CARF (CRISPR-associated Rossmann fold) domain at the N-terminal, an helical hinge domain and a C-terminal endonuclease domain (Pfam:PF09002) [1].
Domain
A, B
PF09002Card1-like, endonuclease domain (Card1_endonuc)Card1-like, endonuclease domainThis is the endonuclease domain found in a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a protein that ...This is the endonuclease domain found in a set of bacterial proteins, including Card1 (cyclic-oligoadenylate-activated single-stranded ribonuclease and single-stranded deoxyribonuclease 1) from Treponema succinifaciens (Swiss:F2NWD3), a protein that is part of type III CRISPR-Cas immune response system. This protein consists of a CARF (CRISPR-associated Rossman fold) domain at the N-terminal, an helical hinge domain and a C-terminal endonuclease domain [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Card1 - -