6WQL | pdb_00006wql

Solution structure of the seed peptide C2 (VBP-1) from pumpkin

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AVicilin_N_likee6wqlA1 A: few secondary structure elementsX: Toxic hairpinH: Ribosome-inactivating protein luffin P1 (From Topology)T: Ribosome-inactivating protein luffin P1F: Vicilin_N_likeECOD (1.6)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006045Cupin 1Domain
IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily
IPR050253Seed Storage and Functional ProteinsFamily
IPR014710RmlC-like jelly roll foldHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
PCA Parent Component: GLN

RESID:  AA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420