6WPC | pdb_00006wpc

Crystal structure of Bacillus thuringiensis Cry1A.2 tryptic core variant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d6wpcd3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
D	d6wpcd2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
D	d6wpcd1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
C	d6wpcc1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
B	d6wpcb1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6wpca3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6wpca2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6wpca1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)
B	SCOP2 Family	delta-Endotoxin (insectocide), middle domain	8104330	4002768	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	delta-Endotoxin (insectocide), middle domain	8104331	3001725	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Raptor_N	e6wpcD1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Raptor_N	ECOD (develop294)
C	Raptor_N	e6wpcC1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Raptor_N	ECOD (develop294)
B	Raptor_N	e6wpcB1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Raptor_N	ECOD (develop294)
A	Head-tail_con	e6wpcA1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Head-tail_con	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Cry1A.2	protein binding binding signaling receptor binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001178	Pesticidal crystal protein, domain II	Domain
A, B, C, D	IPR036399	Pesticidal crystal protein, central domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.