6VSZ | pdb_00006vsz

Crystal structure of a human afucosylated IgG1 Fc expressed in tobacco plants (Nicotiana benthamiana)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6vsza1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd6vszb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae6vszA1 A: a/b three-layered sandwichesX: cradle loop barrelH: N-terminal domain of poxinT: N-terminal domain of poxinF:ECOD (v294.1)
Be6vszB1 A: a/b three-layered sandwichesX: cradle loop barrelH: N-terminal domain of poxinT: N-terminal domain of poxinF:ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Immunoglobulin gamma-1 heavy chain-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR003597Immunoglobulin C1-setDomain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, B
IPR013106Immunoglobulin V-set domainDomain
A, B
IPR003599Immunoglobulin domain subtypeDomain
A, B
IPR007110Immunoglobulin-like domainDomain
A, B
IPR050380Immune Recognition and Response ModulatorsFamily
A, B
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site