6VSU

Arginase from Arabidopsis thaliana in Complex with Ornithine

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
T	SCOP2 Family	Arginase-like amidino hydrolases	8098697	4000424	SCOP2 (2022-06-29)
T	SCOP2 Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2 (2022-06-29)
U	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Arginase/deacetylase-like	8098698	3000260	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	PF00491	e6vsuH1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
R	PF00491	e6vsuR1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
A	PF00491	e6vsuA1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
B	PF00491	e6vsuB1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
C	PF00491	e6vsuC1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
D	PF00491	e6vsuD1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
E	PF00491	e6vsuE1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
F	PF00491	e6vsuF1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
G	PF00491	e6vsuG1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
I	PF00491	e6vsuI1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
J	PF00491	e6vsuJ1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
K	PF00491	e6vsuK1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
L	PF00491	e6vsuL1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
M	PF00491	e6vsuM1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
N	PF00491	e6vsuN1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
O	PF00491	e6vsuO1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
P	PF00491	e6vsuP1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
Q	PF00491	e6vsuQ1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
S	PF00491	e6vsuS1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
T	PF00491	e6vsuT1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
U	PF00491	e6vsuU1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
V	PF00491	e6vsuV1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
W	PF00491	e6vsuW1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)
X	PF00491	e6vsuX1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: Arginase/deacetylase	F: PF00491	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	PF00491	Arginase family (Arginase)	Arginase family	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	Arginase 1, mitochondrial	cation binding transition metal ion binding ion binding binding metal ion binding cobalt ion binding small molecule binding magnesium ion binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds arginase activity agmatinase activity	cellular component organization cellular component biogenesis protein hexamerization cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis oxoacid metabolic process organonitrogen compound biosynthetic process amino acid metabolic process organic acid metabolic process alpha-amino acid metabolic process cellular component organization cellular component biogenesis protein hexamerization cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis oxoacid metabolic process organonitrogen compound biosynthetic process amino acid metabolic process organic acid metabolic process alpha-amino acid metabolic process arginine metabolic process biogenic amine biosynthetic process putrescine biosynthetic process from arginine, using agmatinase organic substance metabolic process organic substance biosynthetic process putrescine metabolic process small molecule metabolic process organonitrogen compound metabolic process cellular metabolic process carboxylic acid metabolic process primary metabolic process polyamine metabolic process putrescine biosynthetic process amine metabolic process biosynthetic process amine biosynthetic process polyamine biosynthetic process putrescine biosynthetic process from arginine metabolic process biogenic amine metabolic process catabolic process glutamine family amino acid catabolic process arginine catabolic process organic acid catabolic process glutamine family amino acid metabolic process cellular catabolic process carboxylic acid catabolic process amino acid catabolic process organonitrogen compound catabolic process L-amino acid catabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process alpha-amino acid catabolic process proteinogenic amino acid catabolic process small molecule catabolic process organic substance catabolic process amide biosynthetic process urea metabolic process nitrogen cycle metabolic process urea cycle amide metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR020855	Ureohydrolase, manganese-binding site	Binding Site
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR023696	Ureohydrolase domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR006035	Ureohydrolase	Family