6V0E | pdb_00006v0e

Lipophilic Envelope-spanning Tunnel B (LetB), Model 3


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FG-alpha, MMR_HSR1e6v0eF1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)
EG-alpha, MMR_HSR1e6v0eE1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)
DG-alpha, MMR_HSR1e6v0eD1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)
CG-alpha, MMR_HSR1e6v0eC1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)
BG-alpha, MMR_HSR1e6v0eB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)
AG-alpha, MMR_HSR1e6v0eA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: G-alpha, MMR_HSR1ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02470MlaD protein (MlaD)MlaD proteinThis family of proteins contains MlaD, which is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane [1]. The family also contains the mce (mammalian cell entry) proteins from Mycobact ...This family of proteins contains MlaD, which is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane [1]. The family also contains the mce (mammalian cell entry) proteins from Mycobacterium tuberculosis. The archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage [2]. This family contains proteins of unknown function from other bacteria.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR003399Mce/MlaDDomain
A, B, C, D, E
IPR051800Intermembrane Transport Protein PqiA/PqiBFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneAlpha-helical polytopicABC transportersMlaD/MlaE transporter